Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
CX3CR1P49238 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 RN7SKP124-201ENST00000364730 341 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.61□□□□□ -1.67
CX3CR1P49238 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.61□□□□□ -1.67
CX3CR1P49238 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 NAP1L4P2-201ENST00000425958 899 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 DSTNP5-201ENST00000427921 523 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 AC012075.1-201ENST00000436549 580 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 GAPDHP58-201ENST00000438477 1006 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 AL138899.2-201ENST00000439139 499 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 AL161636.2-201ENST00000445179 927 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 NOP56P2-201ENST00000447491 769 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.61□□□□□ -1.67
CX3CR1P49238 AC104634.1-201ENST00000452720 462 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 RN7SL189P-201ENST00000468631 289 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 RPL35AP19-201ENST00000469425 329 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 RN7SL273P-201ENST00000481561 299 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 RPL7P40-201ENST00000481703 745 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.61□□□□□ -1.67
CX3CR1P49238 OR9N1P-201ENST00000491296 333 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 AL133372.1-201ENST00000493565 745 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 RN7SL447P-201ENST00000494711 245 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.61□□□□□ -1.67
CX3CR1P49238 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.61□□□□□ -1.67
CX3CR1P49238 RPS27AP18-201ENST00000515536 459 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 SNORD116-30-201ENST00000516468 85 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.61□□□□□ -1.67
CX3CR1P49238 NPM1P52-201ENST00000518264 846 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.61□□□□□ -1.67
CX3CR1P49238 AP006245.2-201ENST00000522004 300 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.61□□□□□ -1.67
CX3CR1P49238 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CX3CR1P49238 AC022884.2-201ENST00000578535 580 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 RN7SL708P-201ENST00000580952 299 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.61□□□□□ -1.67
CX3CR1P49238 AC104695.2-201ENST00000605056 775 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 MIR8080-201ENST00000622224 89 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.61□□□□□ -1.67
CX3CR1P49238 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 ZNF652P1-201ENST00000442420 1309 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CX3CR1P49238 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 MTCO1P22-201ENST00000604619 1360 ntBASIC4.61□□□□□ -1.67
CX3CR1P49238 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CX3CR1P49238 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CX3CR1P49238 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.61□□□□□ -1.67
CX3CR1P49238 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.6□□□□□ -1.67
CX3CR1P49238 AP000542.2-201ENST00000623199 6179 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.6□□□□□ -1.67
CX3CR1P49238 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
CX3CR1P49238 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.6□□□□□ -1.67
CX3CR1P49238 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CX3CR1P49238 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.6□□□□□ -1.67
CX3CR1P49238 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CX3CR1P49238 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.6□□□□□ -1.67
CX3CR1P49238 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.6□□□□□ -1.67
CX3CR1P49238 RNA5SP335-201ENST00000363817 110 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CX3CR1P49238 AL031985.1-201ENST00000392713 418 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CX3CR1P49238 MIR1282-201ENST00000408865 101 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.6□□□□□ -1.67
CX3CR1P49238 RPS29P14-201ENST00000431518 171 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 CLUHP1-201ENST00000435012 1190 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.6□□□□□ -1.67
CX3CR1P49238 DNAJB5P1-201ENST00000454004 806 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 EIF1P7-201ENST00000487533 337 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.6□□□□□ -1.67
CX3CR1P49238 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CX3CR1P49238 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.6□□□□□ -1.67
CX3CR1P49238 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.6□□□□□ -1.67
CX3CR1P49238 AC100784.1-201ENST00000522790 310 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CX3CR1P49238 AC022404.1-201ENST00000555320 273 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.6□□□□□ -1.67
CX3CR1P49238 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.6□□□□□ -1.67
CX3CR1P49238 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.6□□□□□ -1.67
CX3CR1P49238 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.6□□□□□ -1.67
CX3CR1P49238 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.6□□□□□ -1.67
CX3CR1P49238 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.6□□□□□ -1.67
CX3CR1P49238 AL162431.4-201ENST00000604674 411 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 AC010245.2-201ENST00000606908 1167 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CX3CR1P49238 RNA5SP440-201ENST00000612665 119 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 AP001962.1-201ENST00000624114 559 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CX3CR1P49238 CASC19-248ENST00000641674 1356 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
CX3CR1P49238 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms