Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A12P48065 RPSAP39-201ENST00000467439 883 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 RN7SL447P-201ENST00000494711 245 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC6A12P48065 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC6A12P48065 SEC11B-201ENST00000518383 499 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC6A12P48065 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC6A12P48065 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC6A12P48065 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A12P48065 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC6A12P48065 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 SNORD95-201ENST00000579879 68 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC6A12P48065 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A12P48065 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A12P48065 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A12P48065 AC008814.1-201ENST00000603797 406 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 AC011626.1-201ENST00000604710 562 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 AC007204.2-201ENST00000615022 616 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC6A12P48065 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC6A12P48065 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 AC087565.3-202ENST00000642085 1603 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A12P48065 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A12P48065 AC023421.1-201ENST00000590535 1785 ntBASIC5.14□□□□□ -1.59
SLC6A12P48065 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SLC6A12P48065 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SLC6A12P48065 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
SLC6A12P48065 AC006210.2-201ENST00000367074 1545 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 MTCO1P11-201ENST00000429111 1528 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SLC6A12P48065 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 AC092376.2-201ENST00000622621 4116 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 RNU6-670P-201ENST00000364312 104 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SLC6A12P48065 AC104297.1-201ENST00000393779 870 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 RN7SKP229-201ENST00000410465 302 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 AL390774.1-201ENST00000411924 246 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 RPL12P9-201ENST00000412942 488 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC6A12P48065 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.13□□□□□ -1.59
SLC6A12P48065 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC6A12P48065 VTI1BP4-201ENST00000427516 527 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC6A12P48065 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC6A12P48065 RAD1P2-201ENST00000446414 663 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 RPL31P20-201ENST00000449593 360 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 RPS26P41-201ENST00000450370 284 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 PRPF38AP1-201ENST00000451976 933 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 RPL7P6-201ENST00000480903 738 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 RN7SL184P-201ENST00000488308 297 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.13□□□□□ -1.59
SLC6A12P48065 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC6A12P48065 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC6A12P48065 SCARNA21.2-201ENST00000516600 166 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.13□□□□□ -1.59
SLC6A12P48065 RPL10P14-201ENST00000565265 298 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC6A12P48065 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC6A12P48065 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 AC020915.5-201ENST00000596836 964 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 AC009597.2-201ENST00000604659 592 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 AC004477.3-201ENST00000614061 590 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 AL359513.1-201ENST00000614364 557 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 WBP1LP8-201ENST00000617401 327 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC6A12P48065 AC091932.2-201ENST00000623014 291 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SLC6A12P48065 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.13□□□□□ -1.59
SLC6A12P48065 CIR1P2-201ENST00000514821 1342 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SLC6A12P48065 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A12P48065 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
SLC6A12P48065 AL606537.1-201ENST00000607258 2011 ntBASIC5.13□□□□□ -1.59
SLC6A12P48065 OR55B1P-203ENST00000641518 2602 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms