Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC079064.1-201ENST00000528365 362 ntBASIC5.32□□□□□ -1.56
HTTP42858 AL683813.2-201ENST00000605245 502 ntBASIC5.32□□□□□ -1.56
HTTP42858 FAM27B-201ENST00000610601 213 ntBASIC5.32□□□□□ -1.56
HTTP42858 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.32□□□□□ -1.56
HTTP42858 AC012442.3-202ENST00000636742 206 ntBASIC5.32□□□□□ -1.56
HTTP42858 AL137058.3-201ENST00000624531 3099 ntBASIC5.32□□□□□ -1.56
HTTP42858 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 AC032011.1-201ENST00000611703 1549 ntBASIC5.32□□□□□ -1.56
HTTP42858 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.32□□□□□ -1.56
HTTP42858 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
HTTP42858 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HTTP42858 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC5.32□□□□□ -1.56
HTTP42858 SNORA73.1-201ENST00000363107 205 ntBASIC5.32□□□□□ -1.56
HTTP42858 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.32□□□□□ -1.56
HTTP42858 SNORA74D-201ENST00000516404 141 ntBASIC5.32□□□□□ -1.56
HTTP42858 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.32□□□□□ -1.56
HTTP42858 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
HTTP42858 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.32□□□□□ -1.56
HTTP42858 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HTTP42858 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.32□□□□□ -1.56
HTTP42858 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.32□□□□□ -1.56
HTTP42858 AL390879.1-201ENST00000439143 386 ntBASIC5.32□□□□□ -1.56
HTTP42858 MIR4420-201ENST00000583944 77 ntBASIC5.32□□□□□ -1.56
HTTP42858 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.32□□□□□ -1.56
HTTP42858 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HTTP42858 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.32□□□□□ -1.56
HTTP42858 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 AC008758.3-201ENST00000507003 1829 ntBASIC5.31□□□□□ -1.56
HTTP42858 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.31□□□□□ -1.56
HTTP42858 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 RNA5SP366-201ENST00000365454 123 ntBASIC5.31□□□□□ -1.56
HTTP42858 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 AC093578.1-201ENST00000415219 368 ntBASIC5.31□□□□□ -1.56
HTTP42858 AL354766.1-201ENST00000423396 542 ntBASIC5.31□□□□□ -1.56
HTTP42858 AC090804.1-201ENST00000448870 490 ntBASIC5.31□□□□□ -1.56
HTTP42858 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 AC079168.2-201ENST00000453977 416 ntBASIC5.31□□□□□ -1.56
HTTP42858 FTH1P21-201ENST00000512179 511 ntBASIC5.31□□□□□ -1.56
HTTP42858 AC108064.1-201ENST00000513791 460 ntBASIC5.31□□□□□ -1.56
HTTP42858 RN7SKP98-201ENST00000517070 156 ntBASIC5.31□□□□□ -1.56
HTTP42858 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.31□□□□□ -1.56
HTTP42858 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.31□□□□□ -1.56
HTTP42858 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.31□□□□□ -1.56
HTTP42858 AC243756.2-201ENST00000618406 463 ntBASIC5.31□□□□□ -1.56
HTTP42858 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 AC005261.4-201ENST00000600047 1385 ntBASIC5.31□□□□□ -1.56
HTTP42858 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HTTP42858 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HTTP42858 AL672167.2-201ENST00000377164 879 ntBASIC5.31□□□□□ -1.56
HTTP42858 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.31□□□□□ -1.56
HTTP42858 MIR2116-201ENST00000517221 80 ntBASIC5.31□□□□□ -1.56
HTTP42858 AC010476.1-201ENST00000519111 851 ntBASIC5.31□□□□□ -1.56
HTTP42858 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.31□□□□□ -1.56
HTTP42858 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.31□□□□□ -1.56
HTTP42858 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.31□□□□□ -1.56
HTTP42858 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.31□□□□□ -1.56
HTTP42858 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.31□□□□□ -1.56
HTTP42858 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HTTP42858 AC133552.1-201ENST00000569988 4007 ntBASIC5.31□□□□□ -1.56
HTTP42858 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 SPRR2C-201ENST00000290702 219 ntBASIC5.3□□□□□ -1.56
HTTP42858 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.3□□□□□ -1.56
HTTP42858 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.3□□□□□ -1.56
HTTP42858 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.3□□□□□ -1.56
HTTP42858 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.3□□□□□ -1.56
HTTP42858 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.3□□□□□ -1.56
HTTP42858 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 AC019206.1-201ENST00000621938 425 ntBASIC5.3□□□□□ -1.56
HTTP42858 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.3□□□□□ -1.56
HTTP42858 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms