Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.97□□□□□ -1.45
SLC6A4P31645 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.96□□□□□ -1.45
SLC6A4P31645 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SLC6A4P31645 MTND5P31-201ENST00000419366 1374 ntBASIC5.96□□□□□ -1.45
SLC6A4P31645 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC6A4P31645 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC6A4P31645 AP004607.3-201ENST00000530354 3915 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.96□□□□□ -1.46
SLC6A4P31645 MFSD8-239ENST00000641590 2479 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC6A4P31645 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC6A4P31645 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SLC6A4P31645 MIR323A-201ENST00000362199 86 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 SNORA64.1-201ENST00000362600 132 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.96□□□□□ -1.46
SLC6A4P31645 RPS24P7-201ENST00000416921 246 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.96□□□□□ -1.46
SLC6A4P31645 RPS3AP38-201ENST00000435889 763 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AC096775.1-201ENST00000437724 448 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SLC6A4P31645 AL157827.1-201ENST00000447622 132 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.96□□□□□ -1.46
SLC6A4P31645 FRG2FP-204ENST00000453982 852 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AC087672.1-201ENST00000479876 766 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 AC022215.1-201ENST00000481770 362 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AC134050.1-201ENST00000495088 933 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SLC6A4P31645 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AC118465.1-201ENST00000513820 1271 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.96□□□□□ -1.46
SLC6A4P31645 RN7SKP141-201ENST00000516167 338 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AC009097.3-201ENST00000563557 1018 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 AC010547.6-201ENST00000571789 193 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AL359513.1-201ENST00000614364 557 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.96□□□□□ -1.46
SLC6A4P31645 AC090897.3-201ENST00000636973 1157 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
SLC6A4P31645 TTC41P-205ENST00000551270 3963 ntBASIC5.96□□□□□ -1.46
SLC6A4P31645 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SLC6A4P31645 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SLC6A4P31645 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SLC6A4P31645 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SLC6A4P31645 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
SLC6A4P31645 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC6A4P31645 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SLC6A4P31645 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC6A4P31645 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
SLC6A4P31645 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC6A4P31645 GTF2IP4-201ENST00000453092 2054 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SLC6A4P31645 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.95□□□□□ -1.46
SLC6A4P31645 MRE11P1-201ENST00000464884 2127 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SLC6A4P31645 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC6A4P31645 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SLC6A4P31645 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC6A4P31645 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC6A4P31645 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC6A4P31645 LRRC37BP1-201ENST00000398851 714 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 HMGB1P13-201ENST00000406019 642 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 RNA5SP178-201ENST00000410380 128 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC6A4P31645 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.95□□□□□ -1.46
SLC6A4P31645 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SLC6A4P31645 OR5W1P-201ENST00000423705 938 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 AC010099.3-201ENST00000423896 409 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 BRWD1P3-201ENST00000428816 390 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC6A4P31645 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.95□□□□□ -1.46
SLC6A4P31645 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SLC6A4P31645 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC6A4P31645 ZNF886P-201ENST00000450781 723 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 OSTCP1-201ENST00000455507 450 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.95□□□□□ -1.46
SLC6A4P31645 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC6A4P31645 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC6A4P31645 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC6A4P31645 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.95□□□□□ -1.46
SLC6A4P31645 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SLC6A4P31645 RNU6-1028P-201ENST00000517164 93 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC6A4P31645 AC021678.3-201ENST00000517893 476 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 AC078899.1-201ENST00000521432 1185 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 AP003080.1-202ENST00000526526 915 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC6A4P31645 HMGB1P42-201ENST00000532126 553 ntBASIC5.95□□□□□ -1.46
SLC6A4P31645 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC6A4P31645 MIR4260-201ENST00000583107 67 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms