Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC091180.1-201ENST00000462104 372 ntBASIC7.99□□□□□ -1.13
CLIP1P30622 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.99□□□□□ -1.13
CLIP1P30622 RNF123-214ENST00000629802 207 ntTSL 5 BASIC7.99□□□□□ -1.13
CLIP1P30622 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP1P30622 BX284613.1-201ENST00000452221 1641 ntBASIC7.99□□□□□ -1.13
CLIP1P30622 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP1P30622 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP1P30622 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.99□□□□□ -1.13
CLIP1P30622 BCORP1-203ENST00000513194 5093 ntBASIC7.99□□□□□ -1.13
CLIP1P30622 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP1P30622 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP1P30622 SAMM50P1-201ENST00000455403 1399 ntBASIC7.98□□□□□ -1.13
CLIP1P30622 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CLIP1P30622 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP1P30622 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP1P30622 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CLIP1P30622 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP1P30622 RNU6-398P-201ENST00000384143 109 ntBASIC7.98□□□□□ -1.13
CLIP1P30622 SNORA70.10-201ENST00000384515 134 ntBASIC7.98□□□□□ -1.13
CLIP1P30622 HYALP1-201ENST00000417674 1279 ntBASIC7.98□□□□□ -1.13
CLIP1P30622 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.98□□□□□ -1.13
CLIP1P30622 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC7.98□□□□□ -1.13
CLIP1P30622 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.98□□□□□ -1.13
CLIP1P30622 RPL21P133-201ENST00000443666 476 ntBASIC7.98□□□□□ -1.13
CLIP1P30622 RPL5P22-201ENST00000480199 884 ntBASIC7.98□□□□□ -1.13
CLIP1P30622 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.98□□□□□ -1.13
CLIP1P30622 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.98□□□□□ -1.13
CLIP1P30622 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.98□□□□□ -1.13
CLIP1P30622 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CLIP1P30622 NAA60-237ENST00000615865 326 ntTSL 5 BASIC7.98□□□□□ -1.13
CLIP1P30622 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.98□□□□□ -1.13
CLIP1P30622 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC7.98□□□□□ -1.13
CLIP1P30622 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.98□□□□□ -1.13
CLIP1P30622 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
CLIP1P30622 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP1P30622 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP1P30622 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP1P30622 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC7.98□□□□□ -1.13
CLIP1P30622 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP1P30622 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CLIP1P30622 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
CLIP1P30622 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP1P30622 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC7.97□□□□□ -1.13
CLIP1P30622 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP1P30622 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP1P30622 MTHFD2P5-201ENST00000320415 844 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.97□□□□□ -1.13
CLIP1P30622 AC004074.1-201ENST00000421810 1063 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.97□□□□□ -1.13
CLIP1P30622 AL450023.3-201ENST00000440592 271 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 AC000111.2-201ENST00000448200 210 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 OR52E3P-201ENST00000452083 936 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.97□□□□□ -1.13
CLIP1P30622 RN7SL459P-201ENST00000481078 302 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC7.97□□□□□ -1.13
CLIP1P30622 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP1P30622 GAPDHP56-201ENST00000506031 988 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 IGKV1-32-201ENST00000519290 311 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 RAB9BP1-201ENST00000519581 626 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.97□□□□□ -1.13
CLIP1P30622 MORF4L1P3-201ENST00000525966 950 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC7.97□□□□□ -1.13
CLIP1P30622 AC008745.1-201ENST00000604064 271 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.97□□□□□ -1.13
CLIP1P30622 AC091932.2-201ENST00000623014 291 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.97□□□□□ -1.13
CLIP1P30622 DNM1P47-203ENST00000571780 12667 ntBASIC7.97□□□□□ -1.13
CLIP1P30622 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
CLIP1P30622 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP1P30622 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP1P30622 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.97□□□□□ -1.13
CLIP1P30622 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CLIP1P30622 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.96□□□□□ -1.13
CLIP1P30622 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.13
CLIP1P30622 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC7.96□□□□□ -1.13
CLIP1P30622 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
CLIP1P30622 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.96□□□□□ -1.13
CLIP1P30622 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC7.96□□□□□ -1.13
CLIP1P30622 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.96□□□□□ -1.13
CLIP1P30622 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC7.96□□□□□ -1.13
CLIP1P30622 AC063943.1-201ENST00000465434 453 ntBASIC7.96□□□□□ -1.13
CLIP1P30622 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.96□□□□□ -1.13
CLIP1P30622 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.96□□□□□ -1.13
CLIP1P30622 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.96□□□□□ -1.13
CLIP1P30622 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.96□□□□□ -1.13
CLIP1P30622 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC7.96□□□□□ -1.13
CLIP1P30622 AC068790.7-201ENST00000602347 528 ntBASIC7.96□□□□□ -1.13
CLIP1P30622 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
CLIP1P30622 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CLIP1P30622 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.96□□□□□ -1.14
CLIP1P30622 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
CLIP1P30622 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC7.96□□□□□ -1.14
CLIP1P30622 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CLIP1P30622 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
CLIP1P30622 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CLIP1P30622 RNA5SP505-201ENST00000364748 108 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 RN7SKP100-201ENST00000411258 284 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 AC007559.1-201ENST00000428736 355 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.95□□□□□ -1.14
CLIP1P30622 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms