Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC012616.1-201ENST00000600294 197 ntBASIC5.09□□□□□ -1.59
PTPN6P29350 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.09□□□□□ -1.59
PTPN6P29350 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.09□□□□□ -1.59
PTPN6P29350 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.09□□□□□ -1.59
PTPN6P29350 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN6P29350 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN6P29350 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN6P29350 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PTPN6P29350 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PTPN6P29350 AC079298.1-201ENST00000625026 1619 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTPN6P29350 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTPN6P29350 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTPN6P29350 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTPN6P29350 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PTPN6P29350 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.08□□□□□ -1.6
PTPN6P29350 RN7SKP28-201ENST00000364770 305 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 AC007618.1-201ENST00000366455 732 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTPN6P29350 RPL5P19-201ENST00000404228 893 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.08□□□□□ -1.6
PTPN6P29350 MTND4LP13-201ENST00000425022 298 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.08□□□□□ -1.6
PTPN6P29350 RPL12P17-201ENST00000432393 498 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 UBE2V2P3-201ENST00000433562 437 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 AC019185.1-201ENST00000442718 389 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.08□□□□□ -1.6
PTPN6P29350 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.08□□□□□ -1.6
PTPN6P29350 NOP56P2-201ENST00000447491 769 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 RAB28P3-201ENST00000448325 597 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 NPM1P19-201ENST00000450070 712 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTPN6P29350 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PTPN6P29350 ENPP7P11-201ENST00000505915 627 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.08□□□□□ -1.6
PTPN6P29350 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.08□□□□□ -1.6
PTPN6P29350 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.08□□□□□ -1.6
PTPN6P29350 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.08□□□□□ -1.6
PTPN6P29350 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.08□□□□□ -1.6
PTPN6P29350 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.08□□□□□ -1.6
PTPN6P29350 AC004241.3-201ENST00000611728 517 ntBASIC5.08□□□□□ -1.6
PTPN6P29350 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTPN6P29350 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTPN6P29350 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.08□□□□□ -1.6
PTPN6P29350 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTPN6P29350 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.08□□□□□ -1.6
PTPN6P29350 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTPN6P29350 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN6P29350 AL034549.2-201ENST00000618285 3373 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN6P29350 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPN6P29350 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPN6P29350 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN6P29350 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPN6P29350 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPN6P29350 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTPN6P29350 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PTPN6P29350 RNU4-2-201ENST00000365668 141 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN6P29350 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.07□□□□□ -1.6
PTPN6P29350 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.07□□□□□ -1.6
PTPN6P29350 ARAFP1-201ENST00000422172 605 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN6P29350 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.07□□□□□ -1.6
PTPN6P29350 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.07□□□□□ -1.6
PTPN6P29350 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPN6P29350 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPN6P29350 AC093827.1-201ENST00000480094 861 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 RN7SL814P-201ENST00000487715 300 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN6P29350 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPN6P29350 MTND6P2-201ENST00000512226 524 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 ATP5LP3-201ENST00000514223 304 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPN6P29350 AC007225.2-201ENST00000562529 256 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPN6P29350 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.07□□□□□ -1.6
PTPN6P29350 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPN6P29350 AL137072.1-201ENST00000603444 466 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 MIR6826-201ENST00000617808 98 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 AC132068.1-201ENST00000623805 459 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 SAMMSON-209ENST00000641222 1100 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 OR10AB1P-202ENST00000641219 1686 ntBASIC5.07□□□□□ -1.6
PTPN6P29350 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN6P29350 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN6P29350 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN6P29350 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.07□□□□□ -1.6
PTPN6P29350 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPN6P29350 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN6P29350 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN6P29350 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PTPN6P29350 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 RARSP1-201ENST00000542842 1418 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN6P29350 CASC19-248ENST00000641674 1356 ntBASIC5.06□□□□□ -1.6
PTPN6P29350 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms