Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.33□□□□□ -1.56
ABCD3P28288 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.33□□□□□ -1.56
ABCD3P28288 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
ABCD3P28288 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.33□□□□□ -1.56
ABCD3P28288 AP000473.2-201ENST00000602659 1537 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
ABCD3P28288 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ABCD3P28288 AC106872.5-201ENST00000508856 1416 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ABCD3P28288 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ABCD3P28288 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.33□□□□□ -1.56
ABCD3P28288 MFSD8-239ENST00000641590 2479 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ABCD3P28288 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.33□□□□□ -1.56
ABCD3P28288 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ABCD3P28288 RNU6-354P-201ENST00000383862 107 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 RNU6-468P-201ENST00000384003 109 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 RNU6-610P-201ENST00000384264 107 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 HMGB3P19-201ENST00000403971 560 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 ATF1P1-201ENST00000406040 927 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 VTA1P1-201ENST00000414044 866 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 TRGV6-201ENST00000417928 299 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.33□□□□□ -1.56
ABCD3P28288 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.33□□□□□ -1.56
ABCD3P28288 RPS29P14-201ENST00000431518 171 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.33□□□□□ -1.56
ABCD3P28288 RSU1P1-201ENST00000453416 441 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 HMGB1P4-201ENST00000455362 567 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ABCD3P28288 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ABCD3P28288 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
ABCD3P28288 NAMPTP2-201ENST00000505629 1115 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 AC105384.2-201ENST00000508433 640 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 SNORA70.11-201ENST00000515987 138 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 SNORD46.2-201ENST00000516021 102 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 SNORA70.13-201ENST00000516116 138 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.33□□□□□ -1.56
ABCD3P28288 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.33□□□□□ -1.56
ABCD3P28288 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
ABCD3P28288 TRIM51DP-201ENST00000529746 596 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 AP003717.3-201ENST00000544832 1180 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 AC025260.1-201ENST00000548858 430 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.33□□□□□ -1.56
ABCD3P28288 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 NPM1P47-201ENST00000560843 856 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.33□□□□□ -1.56
ABCD3P28288 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.33□□□□□ -1.56
ABCD3P28288 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 VN1R9P-201ENST00000614184 867 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 MIR7973-1-201ENST00000614683 76 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 AP005431.1-201ENST00000618479 319 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.33□□□□□ -1.56
ABCD3P28288 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.33□□□□□ -1.56
ABCD3P28288 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.33□□□□□ -1.56
ABCD3P28288 AC000095.2-202ENST00000637415 154 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 AC132825.7-201ENST00000638744 335 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ABCD3P28288 AC109446.4-201ENST00000623235 2755 ntBASIC5.33□□□□□ -1.56
ABCD3P28288 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ABCD3P28288 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
ABCD3P28288 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.33□□□□□ -1.56
ABCD3P28288 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ABCD3P28288 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ABCD3P28288 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ABCD3P28288 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.33□□□□□ -1.56
ABCD3P28288 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
ABCD3P28288 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ABCD3P28288 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ABCD3P28288 AC015689.2-201ENST00000528172 1738 ntBASIC5.32□□□□□ -1.56
ABCD3P28288 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.32□□□□□ -1.56
ABCD3P28288 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ABCD3P28288 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
ABCD3P28288 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ABCD3P28288 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ABCD3P28288 AC002524.1-201ENST00000411687 547 ntBASIC5.32□□□□□ -1.56
ABCD3P28288 AL024507.1-201ENST00000412741 274 ntBASIC5.32□□□□□ -1.56
ABCD3P28288 TCEA1P4-201ENST00000415066 844 ntBASIC5.32□□□□□ -1.56
ABCD3P28288 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.32□□□□□ -1.56
ABCD3P28288 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.32□□□□□ -1.56
ABCD3P28288 AC048351.1-201ENST00000420064 602 ntBASIC5.32□□□□□ -1.56
ABCD3P28288 AC127526.2-201ENST00000426436 775 ntBASIC5.32□□□□□ -1.56
ABCD3P28288 RPL12P16-201ENST00000431098 498 ntBASIC5.32□□□□□ -1.56
ABCD3P28288 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.32□□□□□ -1.56
ABCD3P28288 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.32□□□□□ -1.56
ABCD3P28288 FHP1-201ENST00000442741 703 ntBASIC5.32□□□□□ -1.56
ABCD3P28288 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.32□□□□□ -1.56
ABCD3P28288 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.32□□□□□ -1.56
ABCD3P28288 AC073109.1-201ENST00000445066 978 ntBASIC5.32□□□□□ -1.56
ABCD3P28288 GXYLT1P1-201ENST00000446657 490 ntBASIC5.32□□□□□ -1.56
ABCD3P28288 OR7E116P-201ENST00000448529 957 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms