Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.45□□□□□ -1.22
ERCC3P19447 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.45□□□□□ -1.22
ERCC3P19447 AC125612.1-201ENST00000547580 377 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC7.45□□□□□ -1.22
ERCC3P19447 MTCYBP28-201ENST00000566728 1132 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 RN7SL753P-201ENST00000581238 290 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AC073046.2-201ENST00000604756 527 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AC124312.4-201ENST00000605533 310 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AP001437.1-201ENST00000608783 456 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 MIR6862-1-201ENST00000613016 70 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AL392048.1-201ENST00000613946 534 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 MIR6862-2-201ENST00000614755 70 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 uc_338.9-201ENST00000617424 182 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 DDX18P4-201ENST00000511690 1966 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC3P19447 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC3P19447 GTF2IP4-201ENST00000453092 2054 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
ERCC3P19447 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC3P19447 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC3P19447 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC3P19447 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC3P19447 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
ERCC3P19447 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC3P19447 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 Z99496.1-201ENST00000469424 1477 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
ERCC3P19447 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC3P19447 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC3P19447 BIN2P1-201ENST00000504996 1530 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
ERCC3P19447 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC3P19447 AC004386.1-201ENST00000393214 761 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
ERCC3P19447 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC3P19447 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC3P19447 PNKDP1-201ENST00000435914 430 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 GTF2IP7-202ENST00000436677 309 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 PPIAP17-201ENST00000438507 471 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 RPL31P3-201ENST00000458430 332 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC3P19447 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC3P19447 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.44□□□□□ -1.22
ERCC3P19447 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC3P19447 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC3P19447 RPL7L1P4-201ENST00000513004 707 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC3P19447 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.44□□□□□ -1.22
ERCC3P19447 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.44□□□□□ -1.22
ERCC3P19447 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC3P19447 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC3P19447 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC3P19447 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.44□□□□□ -1.22
ERCC3P19447 AC006530.1-201ENST00000555980 571 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC3P19447 MIR4301-201ENST00000577203 66 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 RN7SL475P-201ENST00000583379 298 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC7.44□□□□□ -1.22
ERCC3P19447 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 AL451074.6-201ENST00000608512 729 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 AC011939.3-201ENST00000613686 466 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC3P19447 AC120057.5-201ENST00000623840 154 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 AP003072.4-201ENST00000624580 310 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
ERCC3P19447 DCAF13P3-201ENST00000561147 1334 ntBASIC7.44□□□□□ -1.22
ERCC3P19447 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC3P19447 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
ERCC3P19447 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC3P19447 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC3P19447 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.44□□□□□ -1.22
ERCC3P19447 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
ERCC3P19447 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 AC007159.1-201ENST00000566529 4706 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 TNPO1P2-201ENST00000426249 2665 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 HMGB1P5-201ENST00000255320 642 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms