Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC022417.1-201ENST00000624768 1303 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 AL450345.1-202ENST00000605741 3881 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.22□□□□□ -1.57
XRCC1P18887 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
XRCC1P18887 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
XRCC1P18887 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.22□□□□□ -1.57
XRCC1P18887 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
XRCC1P18887 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
XRCC1P18887 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
XRCC1P18887 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
XRCC1P18887 U3.2-201ENST00000362981 210 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 RNU1-19P-201ENST00000363306 165 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
XRCC1P18887 EI24P3-201ENST00000399046 1062 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 OR4K12P-201ENST00000406538 961 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
XRCC1P18887 LYPLA1P1-201ENST00000434514 622 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 EEF1B2P5-201ENST00000444820 548 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 OR52Y1P-201ENST00000452418 828 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.22□□□□□ -1.57
XRCC1P18887 AP000797.2-201ENST00000475768 606 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 RN7SL222P-201ENST00000476452 299 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 AC069304.1-201ENST00000491593 704 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.22□□□□□ -1.57
XRCC1P18887 AC138409.2-202ENST00000507274 458 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 RNU6-943P-201ENST00000516960 98 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.22□□□□□ -1.57
XRCC1P18887 OR8G3P-201ENST00000533406 921 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.22□□□□□ -1.57
XRCC1P18887 AC125612.1-201ENST00000547580 377 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 OR11H3P-201ENST00000554547 982 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 AC093591.2-201ENST00000565254 3843 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.22□□□□□ -1.57
XRCC1P18887 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.22□□□□□ -1.57
XRCC1P18887 AC095055.1-201ENST00000603472 1113 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 AC211433.2-201ENST00000608433 387 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 AP005212.4-201ENST00000614206 710 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
XRCC1P18887 AC090527.3-201ENST00000619041 548 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 AC018445.2-201ENST00000622987 260 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 AC135068.5-201ENST00000624197 983 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.22□□□□□ -1.57
XRCC1P18887 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.22□□□□□ -1.57
XRCC1P18887 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
XRCC1P18887 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
XRCC1P18887 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
XRCC1P18887 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
XRCC1P18887 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.22□□□□□ -1.57
XRCC1P18887 AC011493.1-201ENST00000596753 1632 ntBASIC5.22□□□□□ -1.57
XRCC1P18887 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
XRCC1P18887 AC104623.2-202ENST00000623477 4002 ntBASIC5.21□□□□□ -1.57
XRCC1P18887 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
XRCC1P18887 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.21□□□□□ -1.57
XRCC1P18887 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
XRCC1P18887 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.21□□□□□ -1.58
XRCC1P18887 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
XRCC1P18887 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
XRCC1P18887 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
XRCC1P18887 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
XRCC1P18887 AL353796.1-201ENST00000561542 3241 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
XRCC1P18887 HSPA8P15-201ENST00000401676 786 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
XRCC1P18887 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.21□□□□□ -1.58
XRCC1P18887 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.21□□□□□ -1.58
XRCC1P18887 AC005033.1-201ENST00000428904 813 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.21□□□□□ -1.58
XRCC1P18887 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.21□□□□□ -1.58
XRCC1P18887 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.21□□□□□ -1.58
XRCC1P18887 AL157385.1-201ENST00000446973 268 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 FAR2P1-206ENST00000449736 709 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.21□□□□□ -1.58
XRCC1P18887 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.21□□□□□ -1.58
XRCC1P18887 SEPT7P3-201ENST00000455017 621 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.21□□□□□ -1.58
XRCC1P18887 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.21□□□□□ -1.58
XRCC1P18887 RPS4XP12-201ENST00000461747 709 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 AC005532.2-201ENST00000467154 373 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
XRCC1P18887 AC015864.1-201ENST00000496512 544 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 RPS4XP20-201ENST00000505751 772 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.21□□□□□ -1.58
XRCC1P18887 RNA5SP373-201ENST00000517271 95 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.21□□□□□ -1.58
XRCC1P18887 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.21□□□□□ -1.58
XRCC1P18887 AC022832.1-201ENST00000530718 645 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 AC051619.2-201ENST00000559063 397 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
XRCC1P18887 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.21□□□□□ -1.58
XRCC1P18887 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.21□□□□□ -1.58
XRCC1P18887 AP000769.2-201ENST00000602344 396 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
XRCC1P18887 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
XRCC1P18887 AC025574.1-201ENST00000554784 1653 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 AC109780.1-201ENST00000451768 1344 ntBASIC5.21□□□□□ -1.58
XRCC1P18887 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
XRCC1P18887 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
XRCC1P18887 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
XRCC1P18887 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.2□□□□□ -1.58
XRCC1P18887 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms