Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
ATF4P18848 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.07□□□□□ -1.44
ATF4P18848 APOC2-202ENST00000585786 880 ntTSL 2 BASIC6.07□□□□□ -1.44
ATF4P18848 AC005495.1-201ENST00000586611 1211 ntBASIC6.07□□□□□ -1.44
ATF4P18848 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC6.07□□□□□ -1.44
ATF4P18848 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.07□□□□□ -1.44
ATF4P18848 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATF4P18848 GMFG-210ENST00000601387 497 ntTSL 3 BASIC6.07□□□□□ -1.44
ATF4P18848 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC6.07□□□□□ -1.44
ATF4P18848 SEPT7P9-203ENST00000604116 343 ntBASIC6.07□□□□□ -1.44
ATF4P18848 RBM11P1-201ENST00000604951 799 ntBASIC6.07□□□□□ -1.44
ATF4P18848 AC103710.4-201ENST00000609301 899 ntBASIC6.07□□□□□ -1.44
ATF4P18848 AC108747.1-201ENST00000609508 535 ntBASIC6.07□□□□□ -1.44
ATF4P18848 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATF4P18848 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.07□□□□□ -1.44
ATF4P18848 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC6.07□□□□□ -1.44
ATF4P18848 U6atac.1-201ENST00000616025 117 ntBASIC6.07□□□□□ -1.44
ATF4P18848 AC068722.2-201ENST00000618734 544 ntBASIC6.07□□□□□ -1.44
ATF4P18848 RN7SL301P-202ENST00000618767 298 ntBASIC6.07□□□□□ -1.44
ATF4P18848 AC093591.3-201ENST00000634516 308 ntBASIC6.07□□□□□ -1.44
ATF4P18848 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC6.07□□□□□ -1.44
ATF4P18848 AP000356.4-201ENST00000639500 172 ntBASIC6.07□□□□□ -1.44
ATF4P18848 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATF4P18848 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.07□□□□□ -1.44
ATF4P18848 AP002512.4-202ENST00000641599 4530 ntBASIC6.07□□□□□ -1.44
ATF4P18848 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATF4P18848 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ATF4P18848 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
ATF4P18848 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATF4P18848 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.07□□□□□ -1.44
ATF4P18848 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
ATF4P18848 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.07□□□□□ -1.44
ATF4P18848 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATF4P18848 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATF4P18848 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.07□□□□□ -1.44
ATF4P18848 SAGE3P-201ENST00000619800 1635 ntBASIC6.07□□□□□ -1.44
ATF4P18848 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ATF4P18848 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.06□□□□□ -1.44
ATF4P18848 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
ATF4P18848 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.06□□□□□ -1.44
ATF4P18848 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.06□□□□□ -1.44
ATF4P18848 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 OR9G4-201ENST00000302957 984 ntBASIC6.06□□□□□ -1.44
ATF4P18848 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ATF4P18848 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 SNORA70.9-201ENST00000384370 135 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AC087752.1-201ENST00000391360 558 ntBASIC6.06□□□□□ -1.44
ATF4P18848 VN1R12P-201ENST00000403778 876 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AL390316.1-201ENST00000406279 553 ntBASIC6.06□□□□□ -1.44
ATF4P18848 RN7SKP33-201ENST00000410942 340 ntBASIC6.06□□□□□ -1.44
ATF4P18848 RPL34P19-201ENST00000415903 342 ntBASIC6.06□□□□□ -1.44
ATF4P18848 RAD23BP2-201ENST00000416003 1207 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.06□□□□□ -1.44
ATF4P18848 RPL7P30-201ENST00000420888 709 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 AC234779.1-201ENST00000425910 285 ntBASIC6.06□□□□□ -1.44
ATF4P18848 RANP5-201ENST00000427731 655 ntBASIC6.06□□□□□ -1.44
ATF4P18848 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.06□□□□□ -1.44
ATF4P18848 TRIM60P16-201ENST00000444048 694 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 ARPC3P5-201ENST00000448802 534 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.06□□□□□ -1.44
ATF4P18848 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 RN7SL809P-201ENST00000482040 297 ntBASIC6.06□□□□□ -1.44
ATF4P18848 RN7SL65P-201ENST00000485221 315 ntBASIC6.06□□□□□ -1.44
ATF4P18848 RPL17P2-201ENST00000491913 451 ntBASIC6.06□□□□□ -1.44
ATF4P18848 RN7SL792P-201ENST00000496286 305 ntBASIC6.06□□□□□ -1.44
ATF4P18848 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 AC091874.2-201ENST00000505889 720 ntBASIC6.06□□□□□ -1.44
ATF4P18848 PABPC1P1-201ENST00000506347 591 ntBASIC6.06□□□□□ -1.44
ATF4P18848 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.06□□□□□ -1.44
ATF4P18848 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 AC018797.3-201ENST00000513388 1241 ntBASIC6.06□□□□□ -1.44
ATF4P18848 FABP5P5-201ENST00000515537 406 ntBASIC6.06□□□□□ -1.44
ATF4P18848 RNU7-179P-201ENST00000516608 68 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.06□□□□□ -1.44
ATF4P18848 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC6.06□□□□□ -1.44
ATF4P18848 OR4A11P-201ENST00000529557 906 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AP004247.1-201ENST00000531556 1289 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms