Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFRAP16234 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFRAP16234 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PDGFRAP16234 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFRAP16234 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFRAP16234 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFRAP16234 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFRAP16234 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFRAP16234 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.59□□□□□ -1.51
PDGFRAP16234 RNU6-618P-201ENST00000363518 112 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 RNA5SP487-201ENST00000410186 122 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 AL390774.1-201ENST00000411924 246 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 Z68694.1-201ENST00000413929 841 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 AC013470.3-201ENST00000420252 1194 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 AL133325.1-201ENST00000421090 382 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 AC007064.3-201ENST00000422608 359 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.59□□□□□ -1.51
PDGFRAP16234 RPL19P16-201ENST00000433839 588 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 AC090804.1-201ENST00000448870 490 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 RPS26P41-201ENST00000450370 284 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 AL606490.1-201ENST00000452266 765 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFRAP16234 RN7SL423P-201ENST00000486202 304 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 RN7SL447P-201ENST00000494711 245 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 AK4P6-201ENST00000505168 528 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFRAP16234 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.59□□□□□ -1.51
PDGFRAP16234 AC092709.1-201ENST00000521355 1045 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 YWHABP2-201ENST00000540201 713 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 RN7SL290P-201ENST00000578661 300 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 MIR1269B-201ENST00000580405 75 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PDGFRAP16234 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PDGFRAP16234 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFRAP16234 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFRAP16234 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFRAP16234 SUMO2P15-201ENST00000604285 278 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 AC005252.1-201ENST00000604518 1063 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 AL158062.1-201ENST00000619632 745 ntBASIC5.59□□□□□ -1.51
PDGFRAP16234 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFRAP16234 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFRAP16234 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
PDGFRAP16234 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFRAP16234 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.59□□□□□ -1.52
PDGFRAP16234 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PDGFRAP16234 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
PDGFRAP16234 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
PDGFRAP16234 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFRAP16234 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PDGFRAP16234 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFRAP16234 AL356317.1-201ENST00000396110 1436 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFRAP16234 AC097461.1-201ENST00000568928 2821 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PDGFRAP16234 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFRAP16234 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFRAP16234 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PDGFRAP16234 CR788268.1-201ENST00000603931 1809 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
PDGFRAP16234 AC083799.1-201ENST00000366451 910 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFRAP16234 RNU6-171P-201ENST00000384354 107 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
PDGFRAP16234 MIR1178-201ENST00000408396 91 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 AP000534.2-201ENST00000412729 568 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 AC124944.2-201ENST00000429866 1242 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFRAP16234 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFRAP16234 RPL31P20-201ENST00000449593 360 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFRAP16234 COPS8P2-201ENST00000473228 627 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFRAP16234 AC022133.1-201ENST00000490961 571 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 RPS12P31-201ENST00000491419 398 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 RPS24P16-201ENST00000497294 392 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.58□□□□□ -1.52
PDGFRAP16234 AC022360.1-201ENST00000521058 340 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFRAP16234 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFRAP16234 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFRAP16234 EIF4A2P5-201ENST00000529914 499 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PDGFRAP16234 AC126177.5-201ENST00000549599 178 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFRAP16234 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFRAP16234 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.58□□□□□ -1.52
PDGFRAP16234 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFRAP16234 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFRAP16234 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
PDGFRAP16234 WBP1LP8-201ENST00000617401 327 ntBASIC5.58□□□□□ -1.52
PDGFRAP16234 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFRAP16234 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFRAP16234 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFRAP16234 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PDGFRAP16234 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFRAP16234 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFRAP16234 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFRAP16234 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PDGFRAP16234 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms