Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL592148.2-201ENST00000612210 372 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AC007786.3-201ENST00000615154 596 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC6.22□□□□□ -1.41
COL6A2P12110 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
COL6A2P12110 AL392088.2-201ENST00000637607 285 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.22□□□□□ -1.41
COL6A2P12110 OR7E91P-202ENST00000642062 1198 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 SEC63P2-201ENST00000503863 1939 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL6A2P12110 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL6A2P12110 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL6A2P12110 AL136984.1-201ENST00000607611 1893 ntBASIC6.22□□□□□ -1.41
COL6A2P12110 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.22□□□□□ -1.41
COL6A2P12110 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL6A2P12110 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL6A2P12110 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.21□□□□□ -1.41
COL6A2P12110 NLRP3P1-201ENST00000622303 1785 ntBASIC6.21□□□□□ -1.41
COL6A2P12110 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL6A2P12110 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
COL6A2P12110 AP001541.1-201ENST00000623322 1904 ntBASIC6.21□□□□□ -1.41
COL6A2P12110 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.21□□□□□ -1.42
COL6A2P12110 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
COL6A2P12110 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL6A2P12110 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL6A2P12110 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 RNU6-560P-201ENST00000364007 108 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.21□□□□□ -1.42
COL6A2P12110 GNG5P2-201ENST00000372054 207 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.21□□□□□ -1.42
COL6A2P12110 MT-TP-201ENST00000387461 68 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 AL590084.2-201ENST00000401481 382 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.21□□□□□ -1.42
COL6A2P12110 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.21□□□□□ -1.42
COL6A2P12110 AL034379.1-201ENST00000423216 253 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 AKR1B10P1-201ENST00000425765 942 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 CNOT7P1-201ENST00000429006 852 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 AC129850.1-201ENST00000436203 508 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.21□□□□□ -1.42
COL6A2P12110 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.21□□□□□ -1.42
COL6A2P12110 MTCYBP3-201ENST00000445588 1137 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 AL354872.1-201ENST00000456361 967 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.21□□□□□ -1.42
COL6A2P12110 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.21□□□□□ -1.42
COL6A2P12110 OR11I1P-201ENST00000486033 954 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 RN7SL714P-201ENST00000487050 298 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.21□□□□□ -1.42
COL6A2P12110 AC084024.2-201ENST00000503480 791 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 AC018645.1-201ENST00000505003 109 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.21□□□□□ -1.42
COL6A2P12110 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.21□□□□□ -1.42
COL6A2P12110 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.21□□□□□ -1.42
COL6A2P12110 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.21□□□□□ -1.42
COL6A2P12110 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
COL6A2P12110 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.21□□□□□ -1.42
COL6A2P12110 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.21□□□□□ -1.42
COL6A2P12110 AC027229.1-201ENST00000583887 253 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 MIR4999-201ENST00000585029 91 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 AC005332.4-201ENST00000592752 579 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.21□□□□□ -1.42
COL6A2P12110 AC125494.2-201ENST00000602431 657 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 AC004987.4-201ENST00000603383 338 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
COL6A2P12110 AC105227.2-201ENST00000615075 605 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.21□□□□□ -1.42
COL6A2P12110 AC090246.1-201ENST00000616499 426 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.21□□□□□ -1.42
COL6A2P12110 FP325313.1-201ENST00000638228 703 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.21□□□□□ -1.42
COL6A2P12110 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 AL359091.1-201ENST00000449048 1734 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 AL161912.4-201ENST00000623889 2468 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL6A2P12110 AC079753.1-201ENST00000623243 3868 ntBASIC6.21□□□□□ -1.42
COL6A2P12110 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL6A2P12110 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.2□□□□□ -1.42
COL6A2P12110 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL6A2P12110 RNU1-84P-201ENST00000365447 164 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.2□□□□□ -1.42
COL6A2P12110 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL6A2P12110 AP000357.1-201ENST00000409926 1165 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 LINC01881-201ENST00000416103 412 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 OFD1P11Y-201ENST00000418213 1177 ntBASIC6.2□□□□□ -1.42
COL6A2P12110 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.2□□□□□ -1.42
COL6A2P12110 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms