Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.35□□□□□ -1.55
UBL4AP11441 AL513327.3-201ENST00000602618 469 ntBASIC5.35□□□□□ -1.55
UBL4AP11441 AC079610.2-201ENST00000604818 690 ntBASIC5.35□□□□□ -1.55
UBL4AP11441 NANOGP3-201ENST00000605855 286 ntBASIC5.35□□□□□ -1.55
UBL4AP11441 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.35□□□□□ -1.55
UBL4AP11441 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UBL4AP11441 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.35□□□□□ -1.55
UBL4AP11441 AC129778.1-202ENST00000623812 261 ntBASIC5.35□□□□□ -1.55
UBL4AP11441 AL591379.1-207ENST00000635982 261 ntBASIC5.35□□□□□ -1.55
UBL4AP11441 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.35□□□□□ -1.55
UBL4AP11441 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.35□□□□□ -1.55
UBL4AP11441 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBL4AP11441 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBL4AP11441 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UBL4AP11441 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.35□□□□□ -1.55
UBL4AP11441 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.35□□□□□ -1.55
UBL4AP11441 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
UBL4AP11441 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBL4AP11441 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBL4AP11441 AC083843.3-201ENST00000623679 2186 ntBASIC5.35□□□□□ -1.55
UBL4AP11441 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.35□□□□□ -1.55
UBL4AP11441 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
UBL4AP11441 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
UBL4AP11441 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UBL4AP11441 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
UBL4AP11441 CCT8P1-201ENST00000413611 1657 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.34□□□□□ -1.55
UBL4AP11441 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
UBL4AP11441 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBL4AP11441 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.34□□□□□ -1.55
UBL4AP11441 PDZK1P1-202ENST00000425209 1350 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBL4AP11441 RNA5SP433-201ENST00000364491 114 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 RN7SKP78-201ENST00000364711 318 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.34□□□□□ -1.55
UBL4AP11441 BMS1P3-201ENST00000372011 932 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBL4AP11441 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.34□□□□□ -1.55
UBL4AP11441 AL035405.1-201ENST00000400795 710 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 VN1R12P-201ENST00000403778 876 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 AL158825.1-201ENST00000414735 521 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 OR5M12P-201ENST00000423388 929 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.34□□□□□ -1.55
UBL4AP11441 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 VN1R21P-201ENST00000426703 765 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.34□□□□□ -1.55
UBL4AP11441 AC126120.1-201ENST00000431082 470 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.34□□□□□ -1.55
UBL4AP11441 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.34□□□□□ -1.55
UBL4AP11441 VN1R110P-201ENST00000438988 971 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.34□□□□□ -1.55
UBL4AP11441 AC092685.1-201ENST00000447960 1243 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UBL4AP11441 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.34□□□□□ -1.55
UBL4AP11441 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.34□□□□□ -1.55
UBL4AP11441 AP000547.1-201ENST00000454360 617 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 AC093166.4-201ENST00000457867 318 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 RPL7P48-201ENST00000461513 746 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.34□□□□□ -1.55
UBL4AP11441 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.34□□□□□ -1.55
UBL4AP11441 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.34□□□□□ -1.55
UBL4AP11441 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.34□□□□□ -1.55
UBL4AP11441 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.34□□□□□ -1.55
UBL4AP11441 OR5H7P-201ENST00000514084 930 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.34□□□□□ -1.55
UBL4AP11441 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.34□□□□□ -1.55
UBL4AP11441 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.34□□□□□ -1.55
UBL4AP11441 PCNAP4-201ENST00000532690 730 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 OR4A43P-201ENST00000532938 908 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.34□□□□□ -1.55
UBL4AP11441 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.34□□□□□ -1.55
UBL4AP11441 AC091078.2-201ENST00000557145 559 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.34□□□□□ -1.55
UBL4AP11441 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.34□□□□□ -1.55
UBL4AP11441 AC233702.9-201ENST00000581528 203 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.34□□□□□ -1.55
UBL4AP11441 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UBL4AP11441 AC026741.1-201ENST00000605892 482 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 AL133481.2-203ENST00000607558 139 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 AL445528.2-201ENST00000620582 470 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 AP003497.2-201ENST00000624220 967 ntBASIC5.34□□□□□ -1.55
UBL4AP11441 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.34□□□□□ -1.55
UBL4AP11441 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBL4AP11441 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBL4AP11441 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBL4AP11441 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
UBL4AP11441 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
UBL4AP11441 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBL4AP11441 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBL4AP11441 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBL4AP11441 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBL4AP11441 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBL4AP11441 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.33□□□□□ -1.56
UBL4AP11441 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBL4AP11441 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.33□□□□□ -1.56
UBL4AP11441 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBL4AP11441 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.33□□□□□ -1.56
UBL4AP11441 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBL4AP11441 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBL4AP11441 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms