Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A1P02462 RPL12P25-202ENST00000598100 674 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 AL445423.1-201ENST00000609941 536 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 FAM27B-201ENST00000610601 213 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
COL4A1P02462 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.98□□□□□ -1.45
COL4A1P02462 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A1P02462 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A1P02462 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
COL4A1P02462 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.98□□□□□ -1.45
COL4A1P02462 AC008758.3-201ENST00000507003 1829 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL4A1P02462 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.98□□□□□ -1.45
COL4A1P02462 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A1P02462 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A1P02462 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL4A1P02462 RNA5SP447-201ENST00000363749 119 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 COX6CP17-201ENST00000421389 185 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 AL732292.1-201ENST00000426692 226 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A1P02462 AC108463.1-201ENST00000450258 347 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 AC091180.1-201ENST00000462104 372 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.98□□□□□ -1.45
COL4A1P02462 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A1P02462 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A1P02462 AC093249.4-201ENST00000564755 259 ntBASIC5.98□□□□□ -1.45
COL4A1P02462 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A1P02462 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A1P02462 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A1P02462 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.97□□□□□ -1.45
COL4A1P02462 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
COL4A1P02462 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.97□□□□□ -1.45
COL4A1P02462 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 AC004158.1-201ENST00000564508 4319 ntBASIC5.97□□□□□ -1.45
COL4A1P02462 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.97□□□□□ -1.45
COL4A1P02462 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 MIR129-1-201ENST00000384972 72 ntBASIC5.97□□□□□ -1.45
COL4A1P02462 Z97832.1-201ENST00000402490 328 ntBASIC5.97□□□□□ -1.45
COL4A1P02462 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.97□□□□□ -1.45
COL4A1P02462 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.97□□□□□ -1.45
COL4A1P02462 CBX1P1-201ENST00000440184 427 ntBASIC5.97□□□□□ -1.45
COL4A1P02462 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.97□□□□□ -1.45
COL4A1P02462 AC010326.1-201ENST00000462726 602 ntBASIC5.97□□□□□ -1.45
COL4A1P02462 AL161747.1-201ENST00000480068 358 ntBASIC5.97□□□□□ -1.45
COL4A1P02462 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.97□□□□□ -1.45
COL4A1P02462 AC022726.1-201ENST00000587475 207 ntBASIC5.97□□□□□ -1.45
COL4A1P02462 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC5.97□□□□□ -1.45
COL4A1P02462 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
COL4A1P02462 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.97□□□□□ -1.45
COL4A1P02462 AL450345.1-202ENST00000605741 3881 ntBASIC5.97□□□□□ -1.45
COL4A1P02462 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A1P02462 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.96□□□□□ -1.45
COL4A1P02462 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.96□□□□□ -1.45
COL4A1P02462 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC5.96□□□□□ -1.46
COL4A1P02462 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A1P02462 AC012213.2-201ENST00000562917 4597 ntBASIC5.96□□□□□ -1.46
COL4A1P02462 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.96□□□□□ -1.46
COL4A1P02462 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COL4A1P02462 RNU4-39P-201ENST00000362455 127 ntBASIC5.96□□□□□ -1.46
COL4A1P02462 SNORD113.2-201ENST00000364166 89 ntBASIC5.96□□□□□ -1.46
COL4A1P02462 AL354868.1-201ENST00000417077 482 ntBASIC5.96□□□□□ -1.46
COL4A1P02462 OR5M12P-201ENST00000423388 929 ntBASIC5.96□□□□□ -1.46
COL4A1P02462 NPM1P18-201ENST00000434232 732 ntBASIC5.96□□□□□ -1.46
COL4A1P02462 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.96□□□□□ -1.46
COL4A1P02462 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.96□□□□□ -1.46
COL4A1P02462 HNRNPRP2-201ENST00000528421 743 ntBASIC5.96□□□□□ -1.46
COL4A1P02462 RPL26P30-202ENST00000602923 645 ntBASIC5.96□□□□□ -1.46
COL4A1P02462 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A1P02462 AL359757.1-201ENST00000623176 255 ntBASIC5.96□□□□□ -1.46
COL4A1P02462 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.96□□□□□ -1.46
COL4A1P02462 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A1P02462 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.96□□□□□ -1.46
COL4A1P02462 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A1P02462 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A1P02462 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.96□□□□□ -1.46
COL4A1P02462 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A1P02462 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A1P02462 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A1P02462 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.95□□□□□ -1.46
COL4A1P02462 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A1P02462 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A1P02462 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A1P02462 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A1P02462 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.95□□□□□ -1.46
COL4A1P02462 QRSL1P2-201ENST00000418582 964 ntBASIC5.95□□□□□ -1.46
COL4A1P02462 AC007064.3-201ENST00000422608 359 ntBASIC5.95□□□□□ -1.46
COL4A1P02462 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms