Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL2A1P02458 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL2A1P02458 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
COL2A1P02458 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL2A1P02458 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL2A1P02458 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL2A1P02458 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL2A1P02458 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL2A1P02458 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL2A1P02458 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL2A1P02458 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL2A1P02458 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
COL2A1P02458 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
COL2A1P02458 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL2A1P02458 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL2A1P02458 RPL32P3-201ENST00000359025 275 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 RNA5SP479-201ENST00000364858 117 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 RNA5SP241-201ENST00000391326 114 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.94□□□□□ -1.46
COL2A1P02458 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL2A1P02458 AC119751.6-201ENST00000416712 186 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 NPM1P18-201ENST00000434232 732 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 AL359265.2-201ENST00000434367 631 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.94□□□□□ -1.46
COL2A1P02458 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.94□□□□□ -1.46
COL2A1P02458 SLC25A18P1-201ENST00000449385 454 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 RPS17P2-201ENST00000461663 408 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 RN7SL319P-201ENST00000480656 221 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL2A1P02458 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.94□□□□□ -1.46
COL2A1P02458 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.94□□□□□ -1.46
COL2A1P02458 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.94□□□□□ -1.46
COL2A1P02458 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.94□□□□□ -1.46
COL2A1P02458 AC021193.1-201ENST00000511607 420 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.94□□□□□ -1.46
COL2A1P02458 IGKV2D-10-201ENST00000520194 281 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.94□□□□□ -1.46
COL2A1P02458 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
COL2A1P02458 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.94□□□□□ -1.46
COL2A1P02458 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.94□□□□□ -1.46
COL2A1P02458 AC019322.1-201ENST00000571869 389 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.94□□□□□ -1.46
COL2A1P02458 RN7SL290P-201ENST00000578661 300 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.94□□□□□ -1.46
COL2A1P02458 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.94□□□□□ -1.46
COL2A1P02458 AC020910.3-201ENST00000603701 874 ntBASIC5.94□□□□□ -1.46
COL2A1P02458 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.94□□□□□ -1.46
COL2A1P02458 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL2A1P02458 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.94□□□□□ -1.46
COL2A1P02458 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.94□□□□□ -1.46
COL2A1P02458 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL2A1P02458 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL2A1P02458 AC007159.1-201ENST00000566529 4706 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL2A1P02458 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL2A1P02458 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL2A1P02458 SAMM50P1-201ENST00000455403 1399 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.93□□□□□ -1.46
COL2A1P02458 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL2A1P02458 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL2A1P02458 HYALP1-201ENST00000417674 1279 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 GTF2IP2-201ENST00000424290 697 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 RSL24D1P6-201ENST00000426934 401 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 DNAJC19P7-201ENST00000428811 344 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 NUTF2P7-201ENST00000453086 375 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 AURKAPS2-201ENST00000454983 333 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 RNA5SP116-201ENST00000516132 98 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 RN7SKP21-201ENST00000516503 220 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.93□□□□□ -1.46
COL2A1P02458 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.93□□□□□ -1.46
COL2A1P02458 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.93□□□□□ -1.46
COL2A1P02458 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.93□□□□□ -1.46
COL2A1P02458 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.93□□□□□ -1.46
COL2A1P02458 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.93□□□□□ -1.46
COL2A1P02458 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.93□□□□□ -1.46
COL2A1P02458 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.93□□□□□ -1.46
COL2A1P02458 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.93□□□□□ -1.46
COL2A1P02458 AL138960.1-201ENST00000613838 513 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 AC108359.1-201ENST00000616451 1211 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.93□□□□□ -1.46
COL2A1P02458 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL2A1P02458 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL2A1P02458 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL2A1P02458 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
COL2A1P02458 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL2A1P02458 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
COL2A1P02458 AC100871.1-201ENST00000507871 1456 ntBASIC5.93□□□□□ -1.46
COL2A1P02458 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.92□□□□□ -1.46
COL2A1P02458 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL2A1P02458 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL2A1P02458 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL2A1P02458 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL2A1P02458 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL2A1P02458 AF186996.5-201ENST00000418098 904 ntBASIC5.92□□□□□ -1.46
COL2A1P02458 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.92□□□□□ -1.46
COL2A1P02458 RN7SL354P-201ENST00000469282 294 ntBASIC5.92□□□□□ -1.46
COL2A1P02458 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.92□□□□□ -1.46
COL2A1P02458 SLC25A15P5-201ENST00000508033 253 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms