Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.34□□□□□ -1.56
LDLRP01130 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LDLRP01130 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.34□□□□□ -1.56
LDLRP01130 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.33□□□□□ -1.56
LDLRP01130 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LDLRP01130 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LDLRP01130 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.33□□□□□ -1.56
LDLRP01130 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.33□□□□□ -1.56
LDLRP01130 PABPC1P6-201ENST00000445594 1829 ntBASIC5.33□□□□□ -1.56
LDLRP01130 MAPK10-338ENST00000641647 3362 ntBASIC5.33□□□□□ -1.56
LDLRP01130 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LDLRP01130 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
LDLRP01130 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LDLRP01130 SELENOWP1-201ENST00000322792 252 ntBASIC5.33□□□□□ -1.56
LDLRP01130 MIR365B-201ENST00000362317 111 ntBASIC5.33□□□□□ -1.56
LDLRP01130 RNA5SP326-201ENST00000363209 110 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AC005042.1-201ENST00000393397 800 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AL645927.1-201ENST00000396783 406 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AC016739.1-201ENST00000405359 345 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AMZ2P2-201ENST00000406819 1057 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.33□□□□□ -1.56
LDLRP01130 AL596448.1-201ENST00000415024 392 ntBASIC5.33□□□□□ -1.56
LDLRP01130 RNF10P1-201ENST00000418589 369 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AK4P4-201ENST00000419465 646 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AC019205.1-201ENST00000421830 730 ntBASIC5.33□□□□□ -1.56
LDLRP01130 RNF19BPX-201ENST00000426224 625 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AC092106.1-201ENST00000444291 373 ntBASIC5.33□□□□□ -1.56
LDLRP01130 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.33□□□□□ -1.56
LDLRP01130 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.33□□□□□ -1.56
LDLRP01130 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.33□□□□□ -1.56
LDLRP01130 OR2AO1P-201ENST00000476497 403 ntBASIC5.33□□□□□ -1.56
LDLRP01130 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LDLRP01130 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.33□□□□□ -1.56
LDLRP01130 RN7SL30P-201ENST00000488416 306 ntBASIC5.33□□□□□ -1.56
LDLRP01130 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.33□□□□□ -1.56
LDLRP01130 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.33□□□□□ -1.56
LDLRP01130 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.33□□□□□ -1.56
LDLRP01130 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.33□□□□□ -1.56
LDLRP01130 OR4V1P-201ENST00000525394 1140 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AP000859.1-201ENST00000525536 307 ntBASIC5.33□□□□□ -1.56
LDLRP01130 HIGD1AP5-201ENST00000529959 259 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AC122688.1-201ENST00000541494 223 ntBASIC5.33□□□□□ -1.56
LDLRP01130 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.33□□□□□ -1.56
LDLRP01130 AC074029.2-201ENST00000551045 634 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.33□□□□□ -1.56
LDLRP01130 NMNAT1P5-201ENST00000559657 841 ntBASIC5.33□□□□□ -1.56
LDLRP01130 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LDLRP01130 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.33□□□□□ -1.56
LDLRP01130 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.33□□□□□ -1.56
LDLRP01130 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.33□□□□□ -1.56
LDLRP01130 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.33□□□□□ -1.56
LDLRP01130 RN7SL544P-201ENST00000617232 284 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.33□□□□□ -1.56
LDLRP01130 AC074276.2-201ENST00000619891 348 ntBASIC5.33□□□□□ -1.56
LDLRP01130 RN7SL763P-201ENST00000620922 284 ntBASIC5.33□□□□□ -1.56
LDLRP01130 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.33□□□□□ -1.56
LDLRP01130 FRG1EP-201ENST00000634469 770 ntBASIC5.33□□□□□ -1.56
LDLRP01130 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
LDLRP01130 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LDLRP01130 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LDLRP01130 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LDLRP01130 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
LDLRP01130 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.33□□□□□ -1.56
LDLRP01130 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LDLRP01130 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
LDLRP01130 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.33□□□□□ -1.56
LDLRP01130 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.33□□□□□ -1.56
LDLRP01130 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
LDLRP01130 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.32□□□□□ -1.56
LDLRP01130 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LDLRP01130 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.32□□□□□ -1.56
LDLRP01130 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.32□□□□□ -1.56
LDLRP01130 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDLRP01130 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LDLRP01130 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LDLRP01130 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDLRP01130 Y_RNA.110-201ENST00000363220 99 ntBASIC5.32□□□□□ -1.56
LDLRP01130 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.32□□□□□ -1.56
LDLRP01130 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 UBE2V1P15-201ENST00000407776 448 ntBASIC5.32□□□□□ -1.56
LDLRP01130 RPL37P18-201ENST00000411602 243 ntBASIC5.32□□□□□ -1.56
LDLRP01130 AC002524.1-201ENST00000411687 547 ntBASIC5.32□□□□□ -1.56
LDLRP01130 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.32□□□□□ -1.56
LDLRP01130 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 FMO7P-201ENST00000436045 768 ntBASIC5.32□□□□□ -1.56
LDLRP01130 AC073465.2-201ENST00000440938 498 ntBASIC5.32□□□□□ -1.56
LDLRP01130 MTND2P25-201ENST00000449028 610 ntBASIC5.32□□□□□ -1.56
LDLRP01130 MTND2P39-201ENST00000457230 764 ntBASIC5.32□□□□□ -1.56
LDLRP01130 RPS23P2-201ENST00000463671 415 ntBASIC5.32□□□□□ -1.56
LDLRP01130 AC105918.1-201ENST00000474399 838 ntBASIC5.32□□□□□ -1.56
LDLRP01130 AC022336.1-201ENST00000475510 337 ntBASIC5.32□□□□□ -1.56
LDLRP01130 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.32□□□□□ -1.56
LDLRP01130 ATP5LP5-201ENST00000483050 299 ntBASIC5.32□□□□□ -1.56
LDLRP01130 DUTP1-201ENST00000493631 470 ntBASIC5.32□□□□□ -1.56
LDLRP01130 PCNAP1-201ENST00000505363 709 ntBASIC5.32□□□□□ -1.56
LDLRP01130 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms