Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC013399.1-201ENST00000450311 418 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.95□□□□□ -1.14
HOXA2O43364 RPL26P30-201ENST00000453533 435 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 AC084878.1-201ENST00000480555 648 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.95□□□□□ -1.14
HOXA2O43364 AC138409.2-202ENST00000507274 458 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC7.95□□□□□ -1.14
HOXA2O43364 AC093809.1-201ENST00000509155 340 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 AC110792.2-201ENST00000510278 224 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 RNU6-277P-201ENST00000516272 106 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 SCARNA18.2-201ENST00000516882 84 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.95□□□□□ -1.14
HOXA2O43364 TRMT10BP1-201ENST00000519377 943 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.95□□□□□ -1.14
HOXA2O43364 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.95□□□□□ -1.14
HOXA2O43364 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.95□□□□□ -1.14
HOXA2O43364 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC7.95□□□□□ -1.14
HOXA2O43364 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.95□□□□□ -1.14
HOXA2O43364 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.95□□□□□ -1.14
HOXA2O43364 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.95□□□□□ -1.14
HOXA2O43364 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.95□□□□□ -1.14
HOXA2O43364 AC006116.10-201ENST00000591836 581 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 AP004247.3-201ENST00000608682 624 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 AL158196.1-201ENST00000616786 434 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 AC005899.6-201ENST00000620729 297 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.95□□□□□ -1.14
HOXA2O43364 AC134503.1-201ENST00000633048 54 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 AC026108.1-201ENST00000635444 547 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 MIR665-201ENST00000635949 72 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
HOXA2O43364 TPTEP1-208ENST00000636884 213 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 OR7E161P-202ENST00000641994 1033 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HOXA2O43364 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.95□□□□□ -1.14
HOXA2O43364 UGT2B25P-201ENST00000511504 1586 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HOXA2O43364 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HOXA2O43364 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
HOXA2O43364 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.95□□□□□ -1.14
HOXA2O43364 AC006378.2-201ENST00000623178 2476 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
HOXA2O43364 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HOXA2O43364 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
HOXA2O43364 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HOXA2O43364 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
HOXA2O43364 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
HOXA2O43364 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.95□□□□□ -1.14
HOXA2O43364 WNK1-220ENST00000574564 1401 ntBASIC7.95□□□□□ -1.14
HOXA2O43364 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.94□□□□□ -1.14
HOXA2O43364 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HOXA2O43364 AL356361.1-201ENST00000400943 1459 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.94□□□□□ -1.14
HOXA2O43364 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.94□□□□□ -1.14
HOXA2O43364 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HOXA2O43364 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.94□□□□□ -1.14
HOXA2O43364 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC7.94□□□□□ -1.14
HOXA2O43364 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC7.94□□□□□ -1.14
HOXA2O43364 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
HOXA2O43364 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.94□□□□□ -1.14
HOXA2O43364 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.94□□□□□ -1.14
HOXA2O43364 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HOXA2O43364 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HOXA2O43364 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HOXA2O43364 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HOXA2O43364 RNA5SP114-201ENST00000363780 113 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HOXA2O43364 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
HOXA2O43364 SNORA70.8-201ENST00000384231 136 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 MIR548P-201ENST00000408336 84 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.94□□□□□ -1.14
HOXA2O43364 BOLA3P4-201ENST00000418151 400 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AL445669.1-201ENST00000426743 755 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 RPS27AP6-201ENST00000427962 448 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AC236972.2-201ENST00000434979 310 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 CBWD4P-201ENST00000445695 655 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 RPL7P12-201ENST00000446719 750 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.94□□□□□ -1.14
HOXA2O43364 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.94□□□□□ -1.14
HOXA2O43364 SLC31A1P1-201ENST00000451221 567 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 RN7SL849P-201ENST00000485236 295 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.94□□□□□ -1.14
HOXA2O43364 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.94□□□□□ -1.14
HOXA2O43364 MRPS5P3-201ENST00000515577 166 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 RNU6-583P-201ENST00000516012 92 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 RNU2-46P-201ENST00000517038 113 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AC138832.1-201ENST00000522871 556 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.94□□□□□ -1.14
HOXA2O43364 AP000790.1-201ENST00000528891 737 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.94□□□□□ -1.14
HOXA2O43364 POLR2KP1-201ENST00000553226 168 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AL031846.1-201ENST00000560933 314 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.94□□□□□ -1.14
HOXA2O43364 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.94□□□□□ -1.14
HOXA2O43364 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.94□□□□□ -1.14
HOXA2O43364 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.94□□□□□ -1.14
HOXA2O43364 AL122125.1-201ENST00000616999 600 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AC068722.2-201ENST00000618734 544 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 AC005858.4-201ENST00000623191 700 ntBASIC7.94□□□□□ -1.14
HOXA2O43364 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HOXA2O43364 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms