Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 RN7SL57P-201ENST00000493687 290 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 CDH12P2-201ENST00000504393 298 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM38O00635 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM38O00635 CIR1P1-201ENST00000524055 1133 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM38O00635 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM38O00635 AC091078.2-201ENST00000557145 559 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AL109741.3-201ENST00000561748 592 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM38O00635 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 AC060780.2-201ENST00000589047 198 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AC013244.1-201ENST00000604279 193 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 FAM27E4-201ENST00000605259 342 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AC012557.1-201ENST00000607115 611 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AC021851.1-201ENST00000608537 1082 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM38O00635 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM38O00635 AP003476.1-201ENST00000623984 516 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM38O00635 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM38O00635 AL161756.3-201ENST00000641216 2071 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
TRIM38O00635 AL442128.2-201ENST00000620246 1824 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 AC020656.2-201ENST00000613291 5309 ntBASIC5.85□□□□□ -1.47
TRIM38O00635 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM38O00635 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TRIM38O00635 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM38O00635 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM38O00635 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM38O00635 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM38O00635 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM38O00635 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM38O00635 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
TRIM38O00635 AC097461.1-201ENST00000568928 2821 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AL121839.2-201ENST00000565058 6943 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM38O00635 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TRIM38O00635 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM38O00635 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
TRIM38O00635 MIR143-201ENST00000385300 106 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AF228730.1-201ENST00000397972 663 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 RPL5P19-201ENST00000404228 893 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 SNORA79B-201ENST00000410557 148 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AL024507.1-201ENST00000412741 274 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM38O00635 PTCD2P2-201ENST00000415579 1095 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AC009506.2-201ENST00000420635 840 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AL354766.1-201ENST00000423396 542 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 MRPS21P2-201ENST00000424704 264 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM38O00635 AC126120.1-201ENST00000431082 470 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 TPTE2P3-201ENST00000441562 1189 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM38O00635 RPL7P33-201ENST00000444159 742 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AL096829.2-201ENST00000446582 742 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 RPS3AP15-201ENST00000483874 781 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM38O00635 AC083795.1-201ENST00000491760 320 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AC105233.1-201ENST00000498840 781 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM38O00635 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM38O00635 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM38O00635 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM38O00635 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM38O00635 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM38O00635 AC106734.1-201ENST00000568646 663 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM38O00635 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM38O00635 AC015802.2-201ENST00000589690 189 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.84□□□□□ -1.47
TRIM38O00635 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM38O00635 AL589674.2-201ENST00000604304 337 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AC026741.1-201ENST00000605892 482 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AF129408.1-201ENST00000608767 431 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AP000864.1-201ENST00000609424 650 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 AC119674.1-212ENST00000641155 993 ntBASIC5.84□□□□□ -1.47
TRIM38O00635 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TRIM38O00635 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM38O00635 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM38O00635 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM38O00635 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM38O00635 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
TRIM38O00635 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
TRIM38O00635 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM38O00635 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
TRIM38O00635 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
TRIM38O00635 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM38O00635 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM38O00635 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM38O00635 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM38O00635 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TRIM38O00635 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM38O00635 PDZK1P1-202ENST00000425209 1350 ntBASIC5.83□□□□□ -1.48
TRIM38O00635 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms