Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 AC103703.1-201ENST00000634783 663 ntBASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM49D1C9J1S8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 RN7SKP74-201ENST00000362849 309 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 RN7SKP113-201ENST00000363891 295 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AL391422.1-201ENST00000402155 436 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 RPS26P4-201ENST00000431743 355 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 RPL23AP19-201ENST00000436229 369 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 CYCSP12-201ENST00000437729 300 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AL691482.1-201ENST00000453255 87 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 YWHAEP1-201ENST00000453697 763 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 Z92846.1-201ENST00000456203 268 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 RPS4XP12-201ENST00000461747 709 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AC090686.1-201ENST00000481577 749 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 RN7SL547P-201ENST00000490793 290 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 RPS4XP20-201ENST00000505751 772 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 GTF2F2P1-201ENST00000511083 675 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AC027544.3-201ENST00000535082 757 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 CYCSP40-201ENST00000575927 294 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 RN7SL787P-201ENST00000613000 284 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 WBP1LP8-201ENST00000617401 327 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AL691477.1-201ENST00000624398 162 ntBASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM49D1C9J1S8 AC093849.1-201ENST00000563631 2209 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 ZNF652P1-201ENST00000442420 1309 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AC099654.3-201ENST00000447087 1546 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AL359643.1-201ENST00000404109 423 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 NUDT19P3-201ENST00000404698 555 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 TMBIM7P-201ENST00000418074 855 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 QRSL1P2-201ENST00000418582 964 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 BX323845.1-201ENST00000432417 179 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AL450023.3-201ENST00000440592 271 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AP000281.1-201ENST00000444036 316 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AL031584.1-201ENST00000447169 754 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 RPS26P41-201ENST00000450370 284 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AC015864.1-201ENST00000496512 544 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 RPS26P24-201ENST00000497656 331 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 ASNSP4-201ENST00000511103 447 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AC138938.1-201ENST00000515431 782 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AC069307.1-201ENST00000602820 447 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AC104695.2-201ENST00000605056 775 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 MIR8069-1-201ENST00000616627 86 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 AC022106.2-201ENST00000620114 757 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 MIR8069-2-201ENST00000621412 86 ntBASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms