Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 VN1R21P-201ENST00000426703 765 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AC019185.1-201ENST00000442718 389 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AL157827.1-201ENST00000447622 132 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 RN7SL583P-201ENST00000475692 287 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AC090638.1-201ENST00000498296 909 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 GTF2IP9-201ENST00000502460 301 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 TOMM22P4-201ENST00000511318 336 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AP000619.2-201ENST00000546014 969 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 HSPE1P2-201ENST00000554777 306 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AC004825.1-201ENST00000555068 586 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AC116158.1-201ENST00000560231 2129 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AGGF1P7-201ENST00000562369 913 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 MTND1P8-201ENST00000571424 950 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AC091057.3-201ENST00000602684 733 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 MIR6837-201ENST00000620884 64 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AC099654.9-201ENST00000637055 678 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AP001153.1-201ENST00000641024 338 ntBASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.64□□□□□ -1.51
TBC1D3FA6NER0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 RN7SKP186-201ENST00000365371 303 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 RPL22P22-201ENST00000395439 379 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AL034403.1-201ENST00000399414 885 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 MIR1286-201ENST00000408112 78 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 RPA2P2-201ENST00000419698 796 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC093084.1-201ENST00000424233 687 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 CRIP1P1-201ENST00000427567 185 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC006335.2-201ENST00000437993 330 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC006994.1-201ENST00000438212 839 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC008379.1-201ENST00000463655 464 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 RPL7P39-201ENST00000481157 744 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 EIF1P7-201ENST00000487533 337 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC108729.1-201ENST00000487812 947 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AP001372.4-201ENST00000524889 472 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AL121594.4-201ENST00000556211 1196 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC104229.1-201ENST00000561364 255 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC068020.1-201ENST00000594215 661 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC130352.1-201ENST00000602979 661 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC211433.2-201ENST00000608433 387 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC073342.3-201ENST00000624211 193 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC090506.2-201ENST00000624521 419 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AP000550.3-201ENST00000637734 379 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AC009452.1-201ENST00000640823 606 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 CASC19-264ENST00000641912 1184 ntBASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
TBC1D3FA6NER0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms