Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AC069304.1-201ENST00000491593 704 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AC023424.1-201ENST00000496058 459 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AC010350.1-201ENST00000504908 231 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 HMGB3P16-201ENST00000508037 287 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 BX510359.5-201ENST00000515651 304 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AC012339.2-201ENST00000523996 453 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 HNRNPRP2-201ENST00000528421 743 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AC005868.1-201ENST00000536421 331 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 MIR4472-2-201ENST00000582069 67 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AP002505.2-201ENST00000623585 696 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 CASC19-264ENST00000641912 1184 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 PANDAR-201ENST00000629595 1506 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AC025574.1-201ENST00000554784 1653 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 AL022322.2-201ENST00000624072 20397 ntBASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRAV27A0A087WT01 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 NACAP7-201ENST00000407371 609 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 RPS29P9-201ENST00000440360 171 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 AC073052.1-201ENST00000440417 714 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 HMGB1P4-201ENST00000455362 567 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 RPL7P39-201ENST00000481157 744 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 UBA52P7-201ENST00000486088 380 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 RPL7P51-201ENST00000490532 749 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 AC104109.1-201ENST00000498563 436 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 AC027308.1-201ENST00000517993 110 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 RPL23AP53-201ENST00000521854 457 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 OR4A46P-201ENST00000527255 933 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 AL049767.1-202ENST00000637826 242 ntBASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRAV27A0A087WT01 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 SNORA17.1-201ENST00000362945 126 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 SNORA73.1-201ENST00000363107 205 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 MIR143-201ENST00000385300 106 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 NPM1P4-201ENST00000414095 812 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 QRSL1P2-201ENST00000418582 964 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 AL121776.1-201ENST00000429337 372 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 PCNPP2-201ENST00000441651 455 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 AC011225.1-201ENST00000457751 369 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 GYG1P1-201ENST00000460864 698 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 RPS17P2-201ENST00000461663 408 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 RN7SL799P-201ENST00000475891 298 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 RNA5SP303-201ENST00000516192 130 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 AC027026.1-201ENST00000532323 742 ntBASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRAV27A0A087WT01 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms