Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC104010.1-201ENST00000616889 150 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC090643.1-201ENST00000623600 3100 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 WNK1-220ENST00000574564 1401 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC022507.1-201ENST00000548349 1505 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 MAPK10-323ENST00000641493 3207 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AL078621.1-201ENST00000272567 768 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 SSX6-201ENST00000376932 562 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 RNU6-1227P-201ENST00000383981 107 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 RNA5SP297-201ENST00000391029 113 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 RPL24P7-201ENST00000399435 453 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 VN1R8P-201ENST00000407739 893 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AL773545.3-201ENST00000414297 706 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC092634.6-201ENST00000418558 192 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 NPM1P34-201ENST00000428821 893 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC103563.5-201ENST00000455643 364 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC022364.2-201ENST00000457963 554 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 MEMO1P3-201ENST00000459811 302 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 RPL38P1-201ENST00000460914 211 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 RN7SL392P-201ENST00000473024 299 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC009153.1-201ENST00000485799 496 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 RPS26P24-201ENST00000497656 331 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 IGKV2-29-201ENST00000521304 372 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 MRPL45P2-203ENST00000573318 473 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 RN7SL178P-201ENST00000582930 304 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 CUX2P1-201ENST00000606426 298 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC097468.3-201ENST00000607956 456 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AL353898.2-201ENST00000623000 255 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC106782.7-201ENST00000624024 418 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC133555.5-201ENST00000624430 418 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 TRIM60P14-201ENST00000513444 1419 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 AL356361.1-201ENST00000400943 1459 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 Z93929.1-201ENST00000418200 1475 ntBASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHGA11Q9Y5H2 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 ASNSP1-204ENST00000641977 1664 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms