Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AC004076.2-201ENST00000620532 3323 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 RN7SKP104-201ENST00000362605 328 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 CHMP1B2P-201ENST00000399581 597 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 RPS4XP16-201ENST00000427198 791 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 NDUFB4P8-201ENST00000435351 367 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 DNAJB5P1-201ENST00000454004 806 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 snoU13.29-201ENST00000459370 104 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 GLUD1P3-202ENST00000508551 200 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AC002456.2-201ENST00000509356 380 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AP001357.1-201ENST00000586304 1053 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AC093799.2-201ENST00000610062 578 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AC073575.2-201ENST00000614212 627 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AL590410.1-201ENST00000617925 333 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 AC099654.6-201ENST00000636487 512 ntBASIC5.52□□□□□ -1.53
YIPF1Q9Y548 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.52□□□□□ -1.53
YIPF1Q9Y548 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AL034549.2-201ENST00000618285 3373 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 CDY11P-201ENST00000447168 1651 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 RNU6-1331P-201ENST00000363658 106 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 OR1F12-201ENST00000402365 945 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AL772161.1-201ENST00000439130 476 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC097484.1-201ENST00000471148 389 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC079064.1-201ENST00000528365 362 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC008814.1-201ENST00000603797 406 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AL353662.3-201ENST00000625131 237 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC135068.12-201ENST00000637370 931 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 THAP12P4-201ENST00000528321 2266 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 AC138907.8-201ENST00000623981 2256 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 CUL4AP1-201ENST00000514750 1863 ntBASIC5.51□□□□□ -1.53
YIPF1Q9Y548 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
YIPF1Q9Y548 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms