Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC135068.12-201ENST00000637370 931 ntBASIC4.67□□□□□ -1.66
CLCF1Q9UBD9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLCF1Q9UBD9 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLCF1Q9UBD9 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLCF1Q9UBD9 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLCF1Q9UBD9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLCF1Q9UBD9 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLCF1Q9UBD9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.67□□□□□ -1.66
CLCF1Q9UBD9 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLCF1Q9UBD9 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLCF1Q9UBD9 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 OR9K1P-202ENST00000641111 3217 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 MIR1182-201ENST00000408363 97 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 RN7SKP125-201ENST00000410481 302 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC017019.1-201ENST00000426129 261 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 BX119904.3-201ENST00000428194 957 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 RPS27P18-201ENST00000431701 247 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 OTX2P1-201ENST00000450956 354 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC092647.2-201ENST00000452998 253 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 RN7SL197P-201ENST00000466981 299 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC093827.1-201ENST00000480094 861 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC231760.1-201ENST00000498002 260 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC006427.1-201ENST00000514359 712 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 RN7SKP66-201ENST00000516681 231 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 SEPT10P1-201ENST00000517342 1162 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC022360.1-201ENST00000521058 340 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AP005901.4-201ENST00000577336 569 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 MIR7853-201ENST00000584820 132 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AL713998.2-201ENST00000604538 1198 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 ADAM24P-201ENST00000398655 2101 ntBASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLCF1Q9UBD9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CLCF1Q9UBD9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CLCF1Q9UBD9 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLCF1Q9UBD9 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLCF1Q9UBD9 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.65□□□□□ -1.66
CLCF1Q9UBD9 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
CLCF1Q9UBD9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.65□□□□□ -1.66
CLCF1Q9UBD9 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
CLCF1Q9UBD9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.65□□□□□ -1.66
CLCF1Q9UBD9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLCF1Q9UBD9 OR9G4-201ENST00000302957 984 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 SNURFL-201ENST00000309296 343 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 RNA5SP90-201ENST00000364801 99 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 RN7SKP153-201ENST00000365026 316 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 OR8V1P-201ENST00000395193 873 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 MIR937-201ENST00000401271 86 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AL645733.1-201ENST00000402250 217 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AL589647.1-201ENST00000402485 466 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 DDX39BP1-205ENST00000422507 192 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms