Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 IGLVIV-64-201ENST00000518581 301 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC018442.3-201ENST00000523025 183 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC087272.1-201ENST00000523624 533 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AL731537.2-201ENST00000561565 951 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 SNORA11.6-201ENST00000619030 128 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC079298.2-201ENST00000623885 459 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC091948.2-201ENST00000636510 279 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 SAMMSON-209ENST00000641222 1100 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 BCORP1-203ENST00000513194 5093 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 Z95114.1-201ENST00000624264 14574 ntBASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AL034549.2-201ENST00000618285 3373 ntBASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 RNA5SP339-201ENST00000390987 122 ntBASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AL590806.1-201ENST00000415818 853 ntBASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 NOP56P2-201ENST00000447491 769 ntBASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 RPL7P45-201ENST00000455851 743 ntBASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC093815.1-201ENST00000508637 280 ntBASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 IMPA1P1-201ENST00000510718 842 ntBASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 CDC42P3-201ENST00000518493 633 ntBASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 YWHABP2-201ENST00000540201 713 ntBASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC133552.1-201ENST00000569988 4007 ntBASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 AC022417.1-201ENST00000624768 1303 ntBASIC5.98□□□□□ -1.45
BLOC1S4Q9NUP1 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 RNU1-146P-201ENST00000364015 165 ntBASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 AL034374.1-201ENST00000406329 351 ntBASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 AC124944.2-201ENST00000429866 1242 ntBASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 AC022022.1-201ENST00000430304 178 ntBASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 RPS26P4-201ENST00000431743 355 ntBASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 AC016772.1-201ENST00000444170 1261 ntBASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.97□□□□□ -1.45
BLOC1S4Q9NUP1 AC104634.1-201ENST00000452720 462 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms