Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MIR2116-201ENST00000517221 80 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AL591034.3-201ENST00000605511 685 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AC114774.1-201ENST00000507410 1770 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AC022164.1-201ENST00000568767 2673 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AC233982.1-201ENST00000451247 436 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 RN7SL423P-201ENST00000486202 304 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 HNRNPRP2-201ENST00000528421 743 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AC006115.2-201ENST00000596823 202 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 AL035461.2-201ENST00000619201 524 ntBASIC4.81□□□□□ -1.64
CHD8Q9HCK8 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHD8Q9HCK8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 RNA5SP509-201ENST00000364577 119 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 AL132765.1-201ENST00000434165 553 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 RPL7AP52-201ENST00000458096 790 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 AL022319.1-201ENST00000458183 1167 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 AL138960.1-201ENST00000613838 513 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 AC015908.5-201ENST00000623289 343 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 THAP12P9-201ENST00000503971 2360 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 OR4K17-201ENST00000315543 1032 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 MIR491-201ENST00000384877 84 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 AC021106.1-201ENST00000509020 1058 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 AC012339.2-201ENST00000523996 453 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 AC025884.1-201ENST00000556034 378 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 SRGNP1-201ENST00000603392 451 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 AC096577.2-201ENST00000611455 153 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 AC005899.7-201ENST00000618199 588 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 AC104447.1-201ENST00000624214 2124 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 MTCO1P1-201ENST00000624263 1081 ntBASIC4.8□□□□□ -1.64
CHD8Q9HCK8 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CHD8Q9HCK8 USP9YP3-201ENST00000434481 1766 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AC015977.1-201ENST00000418887 292 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 RPS12P10-201ENST00000427031 377 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AL591363.1-201ENST00000450091 483 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AP003080.1-202ENST00000526526 915 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AC007179.3-201ENST00000604976 235 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AL356863.1-201ENST00000623378 1080 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms