Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 CYCSP6-201ENST00000434498 302 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 AC046176.1-201ENST00000435260 1170 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 RPSAP39-201ENST00000467439 883 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 ENPP7P11-201ENST00000505915 627 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 AC018442.3-201ENST00000523025 183 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 AC006349.1-201ENST00000555526 235 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 RPL10P14-201ENST00000565265 298 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 MIR4675-201ENST00000577898 77 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 ADAM5-202ENST00000399789 1942 ntBASIC5.33□□□□□ -1.56
LRRC40Q9H9A6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 OR55B1P-203ENST00000641518 2602 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC123912.3-201ENST00000600907 1367 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AL450345.1-202ENST00000605741 3881 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 RNU1-74P-201ENST00000384108 171 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 RNU1-149P-201ENST00000390870 161 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 OR8V1P-201ENST00000395193 873 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 OOSP1-201ENST00000398992 1270 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 FAM96AP1-201ENST00000430879 482 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 BX842559.2-201ENST00000451418 605 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC023141.9-201ENST00000458734 412 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC021660.1-201ENST00000465006 554 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC113398.2-201ENST00000507630 558 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 RNA5SP373-201ENST00000517271 95 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 LSM3P2-201ENST00000551246 273 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 FAM72A-208ENST00000607379 1139 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC004477.3-201ENST00000614061 590 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC005840.5-201ENST00000619166 599 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC008079.2-201ENST00000623543 20396 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC092747.4-201ENST00000620519 1861 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 AC107021.2-201ENST00000567714 2095 ntBASIC5.32□□□□□ -1.56
LRRC40Q9H9A6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 Z95331.1-201ENST00000623075 23112 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 RLIMP2-201ENST00000427891 1563 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC009804.1-201ENST00000400949 179 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 TCEA1P3-201ENST00000443005 880 ntBASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.31□□□□□ -1.56
LRRC40Q9H9A6 AC007386.1-201ENST00000455212 582 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms