Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM55Q9BYV6 AC079753.1-201ENST00000623243 3868 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AL512329.1-201ENST00000404600 1592 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC011369.2-201ENST00000624423 1567 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 SNORA7A-201ENST00000384765 139 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AL590084.2-201ENST00000401481 382 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 RNA5SP80-201ENST00000410475 111 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC098592.1-201ENST00000419352 333 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 MRPS36P1-201ENST00000421291 307 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC004074.1-201ENST00000421810 1063 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC007365.2-201ENST00000428806 458 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC002069.1-201ENST00000429649 1159 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 RPL23AP19-201ENST00000436229 369 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 CBX1P4-201ENST00000439415 457 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 MTCYBP34-201ENST00000439552 670 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC118469.1-201ENST00000442943 488 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 HMGB1P4-201ENST00000455362 567 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AL096803.1-201ENST00000456921 1021 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 TPTE2P5-203ENST00000458118 728 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 RN7SL393P-201ENST00000463588 296 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 RPL23AP12-201ENST00000467573 473 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 MTND3P7-201ENST00000474435 343 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 RPL29P23-201ENST00000486188 442 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 WBP1LP4-201ENST00000505043 344 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC091435.1-201ENST00000505442 584 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC090751.1-201ENST00000566966 267 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC079171.1-201ENST00000568788 914 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AP003115.1-201ENST00000569849 463 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 MIR3157-201ENST00000578688 85 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC009237.12-201ENST00000604755 742 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC096553.1-201ENST00000605169 829 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC124312.4-201ENST00000605533 310 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC072039.2-201ENST00000608883 439 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AL139418.1-201ENST00000613613 177 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AL121936.2-201ENST00000641935 662 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 PPBPP2-201ENST00000513150 1362 ntBASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM55Q9BYV6 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 FANCD2P2-201ENST00000437591 1400 ntBASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM55Q9BYV6 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms