Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO3Q9BXY4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
RSPO3Q9BXY4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RSPO3Q9BXY4 AC093591.2-201ENST00000565254 3843 ntBASIC4.71□□□□□ -1.65
RSPO3Q9BXY4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RSPO3Q9BXY4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.71□□□□□ -1.65
RSPO3Q9BXY4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AC010740.1-201ENST00000417035 684 ntBASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AL161722.2-201ENST00000434731 981 ntBASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 RPS29P10-201ENST00000439197 166 ntBASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AL136455.1-201ENST00000441083 1240 ntBASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AL133445.1-201ENST00000467051 452 ntBASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 RPL7P40-201ENST00000481703 745 ntBASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 MORF4L2P1-201ENST00000503761 858 ntBASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 RNU6-1334P-201ENST00000516032 105 ntBASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 FKBP1AP1-201ENST00000594588 318 ntBASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AP000864.1-201ENST00000609424 650 ntBASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 AL591135.1-201ENST00000401578 5914 ntBASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RSPO3Q9BXY4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AC025574.1-201ENST00000554784 1653 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 RNA5SP443-201ENST00000363083 132 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 SNORA2.3-201ENST00000383920 135 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 RPL10P10-201ENST00000403509 664 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AC093655.2-201ENST00000425735 631 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 SPRYD7P1-201ENST00000443861 570 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AC007386.1-201ENST00000455212 582 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 Z92846.1-201ENST00000456203 268 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 RN7SL610P-201ENST00000463845 291 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 BX284632.1-201ENST00000478218 541 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 RN7SL447P-201ENST00000494711 245 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 RNA5SP34-201ENST00000516887 130 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AC012400.1-201ENST00000518452 381 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 RPL23AP53-201ENST00000521854 457 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AC005868.1-201ENST00000536421 331 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AL512310.9-201ENST00000553311 948 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AC239803.2-201ENST00000610161 430 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AP000648.2-201ENST00000624182 404 ntBASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
RSPO3Q9BXY4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms