Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC104964.3-201ENST00000606115 2860 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 OR9K1P-201ENST00000326513 941 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 RNU1-150P-201ENST00000362491 162 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 MIR1203-201ENST00000408812 85 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 RNF10P1-201ENST00000418589 369 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC066692.1-201ENST00000421721 457 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 PSMC1P13-201ENST00000458195 985 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 ACA64.1-201ENST00000459171 127 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 RPS23P2-201ENST00000463671 415 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 RPL32P33-201ENST00000487023 394 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC091917.2-201ENST00000505002 744 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 ENPP7P11-201ENST00000505915 627 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC098976.1-201ENST00000513014 541 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC067904.2-201ENST00000517322 1283 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 OR7E10P-201ENST00000526420 991 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC127024.5-201ENST00000580085 462 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 MIR4260-201ENST00000583107 67 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC010200.2-201ENST00000605098 235 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC090948.2-201ENST00000607363 564 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC005021.1-201ENST00000608730 355 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 BNIP3P41-202ENST00000616656 861 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC131238.1-201ENST00000617135 328 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC129778.1-202ENST00000623812 261 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AL591379.1-207ENST00000635982 261 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 MIR1910-201ENST00000636955 80 ntBASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRDL1Q9BU40 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 AL159987.1-201ENST00000347911 293 ntBASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 RN7SKP275-201ENST00000364626 301 ntBASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 AC019155.1-201ENST00000382242 574 ntBASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 U3.28-201ENST00000391249 210 ntBASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 AC073136.2-201ENST00000417282 849 ntBASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 AC048351.1-201ENST00000420064 602 ntBASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 AC092570.3-201ENST00000420113 693 ntBASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 HMGB3P9-201ENST00000441799 583 ntBASIC4.42□□□□□ -1.7
CHRDL1Q9BU40 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms