Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL21A1Q96P44 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL21A1Q96P44 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 AL731566.1-201ENST00000620490 1937 ntBASIC4.93□□□□□ -1.62
COL21A1Q96P44 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL21A1Q96P44 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL21A1Q96P44 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL21A1Q96P44 SMG1P7-201ENST00000565246 2704 ntBASIC4.93□□□□□ -1.62
COL21A1Q96P44 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL21A1Q96P44 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL21A1Q96P44 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.93□□□□□ -1.62
COL21A1Q96P44 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 RN7SL423P-201ENST00000486202 304 ntBASIC4.93□□□□□ -1.62
COL21A1Q96P44 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 YWHABP2-201ENST00000540201 713 ntBASIC4.93□□□□□ -1.62
COL21A1Q96P44 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL21A1Q96P44 AL049779.2-201ENST00000553847 315 ntBASIC4.93□□□□□ -1.62
COL21A1Q96P44 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 MIR3176-201ENST00000582210 90 ntBASIC4.93□□□□□ -1.62
COL21A1Q96P44 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 AC005252.1-201ENST00000604518 1063 ntBASIC4.93□□□□□ -1.62
COL21A1Q96P44 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 AC022467.1-201ENST00000614738 749 ntBASIC4.93□□□□□ -1.62
COL21A1Q96P44 AC136428.4-201ENST00000634254 1155 ntBASIC4.93□□□□□ -1.62
COL21A1Q96P44 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL21A1Q96P44 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL21A1Q96P44 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL21A1Q96P44 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL21A1Q96P44 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL21A1Q96P44 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.93□□□□□ -1.62
COL21A1Q96P44 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.93□□□□□ -1.62
COL21A1Q96P44 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL21A1Q96P44 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 AC007996.1-201ENST00000620414 2821 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL21A1Q96P44 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL21A1Q96P44 AC023421.1-201ENST00000590535 1785 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 SNORA51.1-201ENST00000363243 140 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 MIR589-201ENST00000385238 99 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 OR4K12P-201ENST00000406538 961 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 AC007738.1-201ENST00000413892 348 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 NANOGP4-201ENST00000427230 913 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 AL161722.1-201ENST00000446972 1032 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 NOP56P2-201ENST00000447491 769 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 RPS26P41-201ENST00000450370 284 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 TPT1P1-201ENST00000458495 518 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 RN7SL814P-201ENST00000487715 300 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 AC022884.2-201ENST00000578535 580 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 AC011626.1-201ENST00000604710 562 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.92□□□□□ -1.62
COL21A1Q96P44 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
COL21A1Q96P44 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL21A1Q96P44 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL21A1Q96P44 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL21A1Q96P44 PCAT14-202ENST00000627127 3935 ntBASIC4.91□□□□□ -1.62
COL21A1Q96P44 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 SNORA67-201ENST00000384423 137 ntBASIC4.91□□□□□ -1.62
COL21A1Q96P44 MIR105-1-201ENST00000385222 81 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms