Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SMARCE1P4-201ENST00000523647 241 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC083923.1-201ENST00000523708 376 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC124293.1-201ENST00000530034 493 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC004825.1-201ENST00000555068 586 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC012414.6-201ENST00000568241 401 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC106785.4-201ENST00000569492 412 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AP001267.4-201ENST00000602598 545 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 MTCYBP22-201ENST00000603788 447 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 SNORD96A-201ENST00000606577 79 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AP005137.2-201ENST00000609238 400 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 Z99129.1-201ENST00000612510 255 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC004241.2-201ENST00000614562 444 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AL121873.1-201ENST00000616013 524 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 STMN1P1-201ENST00000617809 440 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 OR1N1-202ENST00000619659 939 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC137056.2-201ENST00000624055 1958 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 OFD1P17-201ENST00000437639 3018 ntBASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.23□□□□□ -1.41
PTCHD1Q96NR3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC083806.2-201ENST00000617795 2685 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 U3.52-201ENST00000384034 216 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 RNU6-244P-201ENST00000391028 104 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 RPL12P23-201ENST00000405880 490 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC092106.2-201ENST00000436597 487 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 RPL12P49-201ENST00000441100 121 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 USP9YP29-201ENST00000445112 563 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 HMGB1P16-201ENST00000447155 540 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 KF459542.1-201ENST00000450908 553 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 NACAP5-201ENST00000509863 636 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 RNU6-405P-201ENST00000516637 110 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 MTND4LP18-201ENST00000526864 291 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC016957.1-201ENST00000534895 309 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC025260.1-201ENST00000548858 430 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC018558.5-201ENST00000565840 952 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AP003115.1-201ENST00000569849 463 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 MTND1P15-201ENST00000579262 949 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC245052.7-201ENST00000601161 359 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 AC244100.4-201ENST00000617747 388 ntBASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTCHD1Q96NR3 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms