Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AL590763.1-201ENST00000398297 1545 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC005294.1-201ENST00000355509 281 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 MIR105-2-201ENST00000385083 81 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 HSPA8P15-201ENST00000401676 786 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 RPL7L1P9-201ENST00000431298 745 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 FTLP19-201ENST00000433300 394 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 CLUHP1-201ENST00000435012 1190 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 GAPDHP58-201ENST00000438477 1006 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC105399.1-202ENST00000447303 205 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 BX842559.2-201ENST00000451418 605 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC104634.1-201ENST00000452720 462 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC024558.1-201ENST00000505008 528 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC009597.2-201ENST00000604659 592 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AL512329.2-201ENST00000607350 548 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC000068.2-201ENST00000608816 460 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC136428.4-201ENST00000634254 1155 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 PABPC1P6-201ENST00000445594 1829 ntBASIC5.34□□□□□ -1.55
C9orf72Q96LT7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
C9orf72Q96LT7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
C9orf72Q96LT7 AC006210.2-201ENST00000367074 1545 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 RNA5SP183-201ENST00000362452 119 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 RNU1-77P-201ENST00000390868 162 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 RNU4-34P-201ENST00000410431 124 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 RPL35AP24-201ENST00000413846 330 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 PRUNEP1-201ENST00000425846 705 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 CYCSP6-201ENST00000434498 302 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 GAPDHP25-201ENST00000447061 1001 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 DNAJB5P1-201ENST00000454004 806 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 RN7SL189P-201ENST00000468631 289 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AC138409.2-202ENST00000507274 458 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 YWHABP2-201ENST00000540201 713 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AL049779.2-201ENST00000553847 315 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AC004825.1-201ENST00000555068 586 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 MIR4443-201ENST00000585052 53 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AC005252.1-201ENST00000604518 1063 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 MUC2-202ENST00000613187 4845 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AC007342.5-201ENST00000571340 2142 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 AL672167.1-204ENST00000641875 3017 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 SMG1P4-204ENST00000523028 4131 ntBASIC5.33□□□□□ -1.56
C9orf72Q96LT7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf72Q96LT7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 MIR133B-201ENST00000362210 119 ntBASIC5.32□□□□□ -1.56
C9orf72Q96LT7 SLC35E1P1-201ENST00000419313 864 ntBASIC5.32□□□□□ -1.56
C9orf72Q96LT7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 AC079168.1-201ENST00000458741 345 ntBASIC5.32□□□□□ -1.56
C9orf72Q96LT7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 AC023424.1-201ENST00000496058 459 ntBASIC5.32□□□□□ -1.56
C9orf72Q96LT7 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
C9orf72Q96LT7 RNU6-84P-201ENST00000607737 102 ntBASIC5.32□□□□□ -1.56
C9orf72Q96LT7 AC211433.2-201ENST00000608433 387 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms