Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFT1Q96AA3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.86□□□□□ -1.63
RFT1Q96AA3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AL138820.1-201ENST00000617901 5305 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AL159987.1-201ENST00000347911 293 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC107977.1-201ENST00000355745 939 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 OR1L6-202ENST00000373684 1044 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 RPA2P2-201ENST00000419698 796 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 HSPD1P12-201ENST00000429127 1069 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 NDUFS5P5-201ENST00000437256 321 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AL122020.1-201ENST00000472287 459 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AP000797.2-201ENST00000475768 606 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC037198.2-201ENST00000478845 733 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 RPL21P6-201ENST00000479171 504 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC092349.1-201ENST00000504903 310 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC011411.1-201ENST00000509592 876 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC114781.3-201ENST00000512083 142 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 OR5H7P-201ENST00000514084 930 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 RNA5SP438-201ENST00000516561 112 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 SCARNA6.1-201ENST00000516989 238 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC026688.1-201ENST00000520639 1168 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC127381.1-201ENST00000555979 939 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC002310.3-201ENST00000569728 723 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 MIR5010-201ENST00000582846 120 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 MIR4260-201ENST00000583107 67 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 MIR3936-201ENST00000584304 110 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AL008729.2-201ENST00000606393 473 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AP001437.1-201ENST00000608783 456 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC090607.5-201ENST00000615692 224 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 uc_338.7-201ENST00000621834 124 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 MIR6806-201ENST00000622141 64 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC079298.2-201ENST00000623885 459 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFT1Q96AA3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 AC017002.4-201ENST00000604721 1525 ntBASIC4.85□□□□□ -1.63
RFT1Q96AA3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RFT1Q96AA3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFT1Q96AA3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFT1Q96AA3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AL731532.2-201ENST00000623542 1953 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFT1Q96AA3 DDX6P1-205ENST00000441966 1436 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC017079.1-201ENST00000333650 415 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFT1Q96AA3 RNA5SP273-201ENST00000362484 113 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFT1Q96AA3 PPIAP9-201ENST00000403866 498 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 RPS26P13-201ENST00000419030 330 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 RIMKLBP2-201ENST00000424737 654 ntBASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.84□□□□□ -1.63
RFT1Q96AA3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms