Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC4Q92889 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ERCC4Q92889 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC4Q92889 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC4Q92889 MTCO1P28-201ENST00000574177 1528 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC4Q92889 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC4Q92889 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC4Q92889 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC4Q92889 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC008627.1-201ENST00000517511 1704 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 MRRFP1-201ENST00000435941 1675 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC4Q92889 CIR1P2-201ENST00000514821 1342 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.59□□□□□ -1.35
ERCC4Q92889 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ERCC4Q92889 MTHFD2P5-201ENST00000320415 844 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC4Q92889 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.59□□□□□ -1.35
ERCC4Q92889 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ERCC4Q92889 RNA5SP91-201ENST00000390902 119 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 AL356968.2-201ENST00000412769 1257 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.59□□□□□ -1.35
ERCC4Q92889 LUZP4P1-201ENST00000415420 344 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 LIPT1P1-201ENST00000415870 1186 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 USP9YP21-201ENST00000420603 432 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 AL445928.1-201ENST00000435545 222 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ERCC4Q92889 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC4Q92889 RN7SL168P-201ENST00000463821 279 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC005017.1-201ENST00000482002 490 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC4Q92889 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.59□□□□□ -1.35
ERCC4Q92889 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC007834.2-201ENST00000536310 343 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.59□□□□□ -1.35
ERCC4Q92889 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC4Q92889 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC4Q92889 CCDC58P3-201ENST00000590792 430 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.59□□□□□ -1.35
ERCC4Q92889 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.59□□□□□ -1.35
ERCC4Q92889 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC091057.2-201ENST00000602594 792 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 AC073387.2-201ENST00000604797 784 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 RMST_5.1-201ENST00000618704 126 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 AC139792.2-201ENST00000624218 587 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC093849.1-201ENST00000563631 2209 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC4Q92889 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC4Q92889 AC114774.1-201ENST00000507410 1770 ntBASIC6.59□□□□□ -1.35
ERCC4Q92889 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
ERCC4Q92889 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.59□□□□□ -1.36
ERCC4Q92889 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.59□□□□□ -1.36
ERCC4Q92889 AC007842.1-201ENST00000597336 2039 ntBASIC6.59□□□□□ -1.36
ERCC4Q92889 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
ERCC4Q92889 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
ERCC4Q92889 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC4Q92889 AL354854.1-201ENST00000455940 1363 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
ERCC4Q92889 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC4Q92889 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC4Q92889 RN7SKP187-201ENST00000365536 330 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC4Q92889 AP002784.2-201ENST00000397300 549 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC4Q92889 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.58□□□□□ -1.36
ERCC4Q92889 RPS4XP5-201ENST00000419038 768 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC4Q92889 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC4Q92889 AC130360.1-201ENST00000425489 1117 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 AC108479.1-201ENST00000431142 427 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC4Q92889 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.58□□□□□ -1.36
ERCC4Q92889 OR6K5P-201ENST00000447050 945 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 EEF1B2P3-201ENST00000447718 678 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC4Q92889 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC4Q92889 AC116562.1-201ENST00000485355 781 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 AC026414.1-201ENST00000504046 698 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 AC113367.2-201ENST00000505749 160 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 AC112484.3-201ENST00000505910 329 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC4Q92889 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC4Q92889 MTCO3P28-201ENST00000513351 515 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 RN7SKP35-201ENST00000517210 151 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.58□□□□□ -1.36
ERCC4Q92889 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms