Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 COX6B1P3-201ENST00000312310 260 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC017079.1-201ENST00000333650 415 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 RNU6-249P-201ENST00000363016 102 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 SNORA48.4-201ENST00000391089 134 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 RN7SKP29-201ENST00000410957 272 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC092570.3-201ENST00000420113 693 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 BX119904.1-201ENST00000432026 348 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 HMGB3P10-201ENST00000434734 572 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AMYP1-201ENST00000440059 1023 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC012512.1-201ENST00000446594 718 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 OR7E116P-201ENST00000448529 957 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 GEMIN2P1-201ENST00000454246 752 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 NXT1P1-201ENST00000458481 316 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AP000797.2-201ENST00000475768 606 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC107398.1-201ENST00000486904 505 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 MTCO2P9-201ENST00000503214 694 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 GAPDHP71-201ENST00000511530 1003 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC079064.1-201ENST00000528365 362 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 PCNAP4-201ENST00000532690 730 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 UBTFL9-201ENST00000534504 1148 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC006530.1-201ENST00000555980 571 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AL845552.1-201ENST00000556820 323 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC093510.2-201ENST00000562820 896 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 FAM27E4-201ENST00000605259 342 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC108673.3-201ENST00000609183 335 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC048341.3-201ENST00000619323 491 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AL683826.1-201ENST00000624104 627 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AP001052.1-201ENST00000626421 99 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC103703.1-201ENST00000634783 663 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC107Q8WV48 AC107021.2-201ENST00000567714 2095 ntBASIC4.81□□□□□ -1.64
CCDC107Q8WV48 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 UGT2B26P-201ENST00000508672 1613 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 SNORA63.3-201ENST00000362682 132 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 TAF9BP2-201ENST00000400856 499 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 RPL5P19-201ENST00000404228 893 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 RNU4-27P-201ENST00000410889 139 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 PCNPP4-201ENST00000414817 517 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 HSPE1P16-201ENST00000426640 348 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 HMGB1P5-202ENST00000451497 985 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 CST12P-201ENST00000457644 362 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 AC068228.1-201ENST00000461723 211 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 AC037198.2-201ENST00000478845 733 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 NPM1P17-201ENST00000479221 602 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 NPM1P29-201ENST00000483112 803 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 RBBP4P1-201ENST00000502424 1276 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 AC092349.1-201ENST00000504903 310 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 AC019227.1-201ENST00000526902 510 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 AC068993.1-201ENST00000546724 589 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 AC139697.1-201ENST00000548429 745 ntBASIC4.8□□□□□ -1.64
CCDC107Q8WV48 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC107Q8WV48 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms