Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC026348.1-201ENST00000462549 1053 ntBASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 AC058823.1-201ENST00000485315 474 ntBASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 AC006427.1-201ENST00000514359 712 ntBASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 AP004607.2-201ENST00000533949 322 ntBASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 AC090022.1-201ENST00000546569 311 ntBASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 AGGF1P9-201ENST00000561884 913 ntBASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 NPM1P45-201ENST00000583151 559 ntBASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 AC005252.1-201ENST00000604518 1063 ntBASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 RNA5SP440-201ENST00000612665 119 ntBASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CCDC112Q8NEF3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 RN7SKP28-201ENST00000364770 305 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AL390316.1-201ENST00000406279 553 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 NACAP7-201ENST00000407371 609 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AC013429.2-201ENST00000418798 781 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 CLUHP1-201ENST00000435012 1190 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AC005297.1-201ENST00000444765 862 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 GAPDHP25-201ENST00000447061 1001 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 MYO5BP2-201ENST00000449815 1277 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AC011225.1-201ENST00000457751 369 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 RN7SL177P-201ENST00000476596 299 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 SNORD95-201ENST00000579879 68 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 TAS2R6P-201ENST00000605022 826 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AC022467.1-201ENST00000614738 749 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AL118522.2-201ENST00000616045 615 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AL132656.3-201ENST00000606384 1595 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 AC012078.1-201ENST00000405035 1646 ntBASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC112Q8NEF3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 RNU1-74P-201ENST00000384108 171 ntBASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 AL035079.1-201ENST00000405210 287 ntBASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 U3.32-201ENST00000408116 212 ntBASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 OR3A2-201ENST00000408891 1076 ntBASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 RN7SKP199-201ENST00000410325 305 ntBASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 EIF4A1P1-201ENST00000420241 934 ntBASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 RPS26P4-201ENST00000431743 355 ntBASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 GSTM5P1-201ENST00000434751 660 ntBASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 CYCSP34-201ENST00000458172 304 ntBASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 IGLV2-28-201ENST00000520681 304 ntBASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 RPL23AP53-201ENST00000521854 457 ntBASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC112Q8NEF3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
CCDC112Q8NEF3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC112Q8NEF3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC112Q8NEF3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC112Q8NEF3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.68□□□□□ -1.5
CCDC112Q8NEF3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC112Q8NEF3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms