Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 MTATP6P25-201ENST00000574491 261 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 TAS2R6P-201ENST00000605022 826 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC079791.1-201ENST00000605356 973 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC092944.2-201ENST00000605443 889 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC107905.1-201ENST00000616204 426 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC135068.12-201ENST00000637370 931 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AC026523.2-201ENST00000625039 7739 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AC006210.2-201ENST00000367074 1545 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 U8.4-201ENST00000363626 134 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 OR1L6-202ENST00000373684 1044 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 RNU1-74P-201ENST00000384108 171 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 RNU1-106P-201ENST00000384382 164 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 SNORA48.4-201ENST00000391089 134 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 U3.36-201ENST00000408418 213 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 RNU4-34P-201ENST00000410431 124 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 BMS1P13-201ENST00000417301 885 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 MYO5BP2-201ENST00000449815 1277 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AC026348.1-201ENST00000462549 1053 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 BX284632.1-201ENST00000478218 541 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AC004815.1-201ENST00000484185 331 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AC008638.1-201ENST00000506035 866 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AC022832.1-201ENST00000530718 645 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AC025423.2-201ENST00000537570 439 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 MIR3691-201ENST00000578066 90 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 OOSP1P2-201ENST00000579644 351 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AP000919.1-201ENST00000582850 985 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AL139407.1-201ENST00000613826 1175 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AC016769.4-201ENST00000616893 535 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AC118658.2-201ENST00000618697 459 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 SAMMSON-227ENST00000642114 1199 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AL513548.1-201ENST00000562904 1724 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf40Q8IXQ3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 TCP1P3-201ENST00000414406 1498 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 GNG5P5-201ENST00000420444 220 ntBASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf40Q8IXQ3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms