Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 CLUHP1-201ENST00000435012 1190 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 RPL23AP19-201ENST00000436229 369 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 HMGN1P36-201ENST00000446623 298 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AC104634.1-201ENST00000452720 462 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 RANP1-206ENST00000455094 651 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 RPL7P40-201ENST00000481703 745 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 HMGB3P16-201ENST00000508037 287 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AC074087.1-201ENST00000512059 724 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 HMGB1P40-201ENST00000525121 540 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 BLZF2P-201ENST00000553776 1130 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 FO393422.1-201ENST00000603908 708 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AP000648.2-201ENST00000624182 404 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AL596275.2-204ENST00000641628 552 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AL596275.2-206ENST00000641957 626 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AC073869.10-201ENST00000642016 354 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AL513548.1-201ENST00000562904 1724 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 SCARNA15-201ENST00000607520 4325 ntBASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC50Q8IVM0 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 RNA5SP234-201ENST00000363916 119 ntBASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 RN7SKP199-201ENST00000410325 305 ntBASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 AC104843.2-201ENST00000427666 297 ntBASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 FTLP19-201ENST00000433300 394 ntBASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 ARL4AP1-201ENST00000503220 705 ntBASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 AL162431.4-201ENST00000604674 411 ntBASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 AC015982.1-201ENST00000608113 465 ntBASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 TMEM30CP-203ENST00000637814 1035 ntBASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 CASC19-255ENST00000641733 1385 ntBASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 LINC01355-201ENST00000566551 5444 ntBASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
CCDC50Q8IVM0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 AC126323.6-202ENST00000568092 3511 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 MIR1282-201ENST00000408865 101 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 RPL36AP10-201ENST00000421785 322 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 DSTNP5-201ENST00000427921 523 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 AC012075.1-201ENST00000436549 580 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 RPS11P7-201ENST00000442125 465 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 RPL31P15-201ENST00000449770 338 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 DNAJB5P1-201ENST00000454004 806 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 SEPT7P3-201ENST00000455017 621 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 AC011225.1-201ENST00000457751 369 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 TAS2R6P-201ENST00000605022 826 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 AP003072.5-201ENST00000623872 773 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 AL691477.1-201ENST00000624398 162 ntBASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC50Q8IVM0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC50Q8IVM0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC50Q8IVM0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC50Q8IVM0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
CCDC50Q8IVM0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC50Q8IVM0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms