Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 FTH1P20-201ENST00000434913 548 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC072039.1-201ENST00000477611 581 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 PABPC1P1-201ENST00000506347 591 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC010285.3-201ENST00000511668 676 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 IGKV2-36-201ENST00000519999 223 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AL133399.1-201ENST00000527476 298 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AP004609.2-201ENST00000532177 190 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC068135.2-201ENST00000569293 1028 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC124916.2-201ENST00000604416 224 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC005332.6-201ENST00000613178 446 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 U6.42-201ENST00000618440 107 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 MIR6811-201ENST00000620409 58 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AL359396.1-201ENST00000623151 2376 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 MFSD8-219ENST00000641228 2559 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 CASC19-248ENST00000641674 1356 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 ASNSP1-204ENST00000641977 1664 ntBASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS4Q8IUM7 AC010401.2-201ENST00000575137 4934 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 MTND5P24-201ENST00000438892 1767 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AC074141.1-201ENST00000588129 2995 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 GCNT1P4-201ENST00000404096 329 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AL035422.1-201ENST00000414193 397 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 DPPA2P1-201ENST00000428060 556 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 PMS2P9-201ENST00000441237 515 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 RPL5P7-201ENST00000444235 813 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AL035551.1-201ENST00000446931 348 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AL591363.1-201ENST00000450091 483 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 HMGB1P7-201ENST00000450921 612 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 SRRM1P2-201ENST00000464531 1192 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AC015724.1-201ENST00000478577 156 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AC068724.1-201ENST00000487100 792 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AC093281.2-201ENST00000510153 597 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 MTCO1P30-201ENST00000515244 580 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 RN7SKP283-201ENST00000517197 270 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AC060788.1-201ENST00000521318 469 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 EIF4A2P5-201ENST00000529914 499 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AC106785.4-201ENST00000569492 412 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 LINC00556-201ENST00000569603 412 ntBASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS4Q8IUM7 RN7SL208P-201ENST00000577964 296 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms