Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC002127.1-201ENST00000421305 225 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC019205.1-201ENST00000421830 730 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC112492.2-201ENST00000432774 1030 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 RPS20P1-201ENST00000434853 354 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 RPL12P31-201ENST00000478433 450 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC015864.1-201ENST00000496512 544 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 SNORA48.9-201ENST00000516419 162 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 RNU6-1004P-201ENST00000516584 111 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 RNU6-1308P-201ENST00000516817 103 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC008083.2-201ENST00000546707 476 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC100814.1-201ENST00000606963 623 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC037198.3-201ENST00000616754 526 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC016957.2-201ENST00000616998 848 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC022106.2-201ENST00000620114 757 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AP000648.2-201ENST00000624182 404 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AC027088.4-201ENST00000611559 1947 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 AL672167.1-204ENST00000641875 3017 ntBASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
KCNIP4Q6PIL6 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
KCNIP4Q6PIL6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.28□□□□□ -1.73
KCNIP4Q6PIL6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
KCNIP4Q6PIL6 PWAR1-201ENST00000624188 2414 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 RNA5SP326-201ENST00000363209 110 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 UBBP2-201ENST00000376781 231 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 OR2AH1P-201ENST00000425717 928 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 RPL7P56-201ENST00000429441 717 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 RPS7P3-201ENST00000443360 580 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 AC090804.1-201ENST00000448870 490 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 AC004890.1-201ENST00000461005 181 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 RPSAP37-201ENST00000470913 821 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 AP002453.1-201ENST00000492327 668 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 SNRPCP11-201ENST00000492453 205 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 HMGB1P3-201ENST00000502802 616 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 AC113367.2-201ENST00000505749 160 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 HMGB3P16-201ENST00000508037 287 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 RNU2-45P-201ENST00000516068 187 ntBASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNIP4Q6PIL6 AL133247.2-201ENST00000603236 482 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms