Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CTR9Q6PD62 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTR9Q6PD62 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTR9Q6PD62 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTR9Q6PD62 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTR9Q6PD62 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTR9Q6PD62 SAMMSON-213ENST00000641336 1521 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTR9Q6PD62 SNORA58B-201ENST00000364259 136 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTR9Q6PD62 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTR9Q6PD62 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 AC007394.1-201ENST00000421941 531 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 AC017019.1-201ENST00000426129 261 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 AC079168.1-201ENST00000458741 345 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 CBX1P5-201ENST00000475330 559 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 RN7SL591P-201ENST00000496150 292 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 AC024940.3-201ENST00000538551 316 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTR9Q6PD62 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTR9Q6PD62 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 TAS2R6P-201ENST00000605022 826 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 AL121612.2-201ENST00000612261 482 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 RPSAP73-201ENST00000614820 330 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 AC007786.3-201ENST00000615154 596 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 MIR7155-201ENST00000615925 56 ntBASIC6.26□□□□□ -1.41
CTR9Q6PD62 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTR9Q6PD62 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTR9Q6PD62 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTR9Q6PD62 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
CTR9Q6PD62 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTR9Q6PD62 AL360270.2-201ENST00000562952 5985 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTR9Q6PD62 PANDAR-201ENST00000629595 1506 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CTR9Q6PD62 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTR9Q6PD62 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CTR9Q6PD62 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTR9Q6PD62 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTR9Q6PD62 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.25□□□□□ -1.41
CTR9Q6PD62 RNA5SP507-201ENST00000363603 121 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.25□□□□□ -1.41
CTR9Q6PD62 RPS4XP16-201ENST00000427198 791 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 AC124944.2-201ENST00000429866 1242 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 NOP56P2-201ENST00000447491 769 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 TAAR4P-201ENST00000454843 1039 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 RPSAP50-201ENST00000481955 852 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 AC093270.2-201ENST00000486157 792 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CTR9Q6PD62 AC130364.2-201ENST00000528639 604 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.25□□□□□ -1.41
CTR9Q6PD62 HMGN2P6-201ENST00000551091 273 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 AC233702.9-201ENST00000581528 203 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.25□□□□□ -1.41
CTR9Q6PD62 AC006116.3-201ENST00000592968 361 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.25□□□□□ -1.41
CTR9Q6PD62 AC010632.3-201ENST00000611377 369 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CTR9Q6PD62 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CTR9Q6PD62 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.25□□□□□ -1.41
CTR9Q6PD62 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CTR9Q6PD62 AC093591.2-201ENST00000565254 3843 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTR9Q6PD62 AC079298.1-201ENST00000625026 1619 ntBASIC6.25□□□□□ -1.41
CTR9Q6PD62 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CTR9Q6PD62 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 NUDT19P3-201ENST00000404698 555 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 SNORA11B-201ENST00000408175 129 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 RN7SKP126-201ENST00000411143 300 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC009784.1-201ENST00000426484 460 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms