Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC097461.1-201ENST00000568928 2821 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 NSRP1P1-201ENST00000444067 1693 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 RN7SKP185-201ENST00000362813 326 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 RNU6-1339P-201ENST00000363574 91 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AL590290.1-201ENST00000405336 380 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 RNA5SP431-201ENST00000410312 120 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 RNU2-18P-201ENST00000411224 162 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 RPS24P8-201ENST00000431490 402 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC112492.2-201ENST00000432774 1030 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 OR2L9P-201ENST00000444456 913 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 COX4I1P2-201ENST00000447446 547 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 ZNF886P-201ENST00000450781 723 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AL157777.1-201ENST00000468100 304 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 TRBV8-2-201ENST00000475637 270 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC021146.5-201ENST00000503544 545 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 HPRT1P2-201ENST00000505250 544 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 RN7SKP287-201ENST00000516546 266 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC020937.1-201ENST00000519677 1013 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AP001858.2-201ENST00000536213 601 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 ZNF322P1-201ENST00000568013 1209 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 EIF1P6-201ENST00000600054 334 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC022022.2-201ENST00000602989 360 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 VN1R74P-201ENST00000613259 503 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 MIR6811-201ENST00000620409 58 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 BX649567.1-201ENST00000642071 1134 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 AC144833.1-201ENST00000567953 4089 ntBASIC5.73□□□□□ -1.49
RNF220Q5VTB9 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF220Q5VTB9 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC005224.3-201ENST00000584683 2140 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC092376.2-201ENST00000622621 4116 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 SNORA43.1-201ENST00000364863 140 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 RNA5SP485-201ENST00000365053 119 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 RNU6-317P-201ENST00000384031 107 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC003045.1-201ENST00000398779 713 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 MTCO1P56-201ENST00000401674 224 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms