Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC012400.1-201ENST00000518452 381 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRK2Q5S007 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRK2Q5S007 CYP1D1P-201ENST00000416662 1433 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 AC010928.1-201ENST00000592477 1447 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRK2Q5S007 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRK2Q5S007 AC120338.1-201ENST00000625074 1541 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRK2Q5S007 U3.30-201ENST00000391308 210 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 RPL12P43-201ENST00000420608 499 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 AC091390.3-201ENST00000426478 338 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 FHP1-201ENST00000442741 703 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 AC079080.1-201ENST00000479841 822 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 KC877982.1-201ENST00000602313 470 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 AL035461.2-201ENST00000619201 524 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LRRK2Q5S007 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 AC100757.1-201ENST00000616872 1835 ntBASIC4.47□□□□□ -1.69
LRRK2Q5S007 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
LRRK2Q5S007 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LRRK2Q5S007 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRK2Q5S007 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LRRK2Q5S007 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LRRK2Q5S007 RNU1-136P-201ENST00000384181 164 ntBASIC4.46□□□□□ -1.69
LRRK2Q5S007 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
LRRK2Q5S007 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.46□□□□□ -1.69
LRRK2Q5S007 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.46□□□□□ -1.69
LRRK2Q5S007 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.46□□□□□ -1.69
LRRK2Q5S007 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.46□□□□□ -1.69
LRRK2Q5S007 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
LRRK2Q5S007 SCARNA13-201ENST00000516672 275 ntBASIC4.46□□□□□ -1.69
LRRK2Q5S007 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
LRRK2Q5S007 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
LRRK2Q5S007 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.46□□□□□ -1.69
LRRK2Q5S007 AC013731.1-201ENST00000604340 883 ntBASIC4.46□□□□□ -1.69
LRRK2Q5S007 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.46□□□□□ -1.69
LRRK2Q5S007 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.46□□□□□ -1.69
LRRK2Q5S007 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.46□□□□□ -1.69
LRRK2Q5S007 AC090220.1-201ENST00000593078 1699 ntBASIC4.46□□□□□ -1.7
LRRK2Q5S007 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRRK2Q5S007 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRRK2Q5S007 AL359922.2-201ENST00000581788 3017 ntBASIC4.46□□□□□ -1.7
LRRK2Q5S007 MAPK10-323ENST00000641493 3207 ntBASIC4.46□□□□□ -1.7
LRRK2Q5S007 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
LRRK2Q5S007 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
LRRK2Q5S007 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.46□□□□□ -1.7
LRRK2Q5S007 KRT8P51-201ENST00000438938 274 ntBASIC4.46□□□□□ -1.7
LRRK2Q5S007 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.46□□□□□ -1.7
LRRK2Q5S007 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRRK2Q5S007 SNORA67.7-201ENST00000516664 135 ntBASIC4.46□□□□□ -1.7
LRRK2Q5S007 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.46□□□□□ -1.7
LRRK2Q5S007 AC009237.13-201ENST00000603193 276 ntBASIC4.46□□□□□ -1.7
LRRK2Q5S007 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRRK2Q5S007 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRRK2Q5S007 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRRK2Q5S007 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.46□□□□□ -1.7
LRRK2Q5S007 AC104162.1-201ENST00000430831 2382 ntBASIC4.46□□□□□ -1.7
LRRK2Q5S007 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRRK2Q5S007 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC4.46□□□□□ -1.7
LRRK2Q5S007 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.45□□□□□ -1.7
LRRK2Q5S007 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC4.45□□□□□ -1.7
LRRK2Q5S007 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRRK2Q5S007 MIR670-201ENST00000390142 98 ntBASIC4.45□□□□□ -1.7
LRRK2Q5S007 AC114755.2-201ENST00000413520 361 ntBASIC4.45□□□□□ -1.7
LRRK2Q5S007 AC114755.5-201ENST00000447760 831 ntBASIC4.45□□□□□ -1.7
LRRK2Q5S007 AC010733.1-201ENST00000451515 401 ntBASIC4.45□□□□□ -1.7
LRRK2Q5S007 AC090589.1-201ENST00000473109 362 ntBASIC4.45□□□□□ -1.7
LRRK2Q5S007 SCARNA22-201ENST00000503991 125 ntBASIC4.45□□□□□ -1.7
LRRK2Q5S007 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.45□□□□□ -1.7
LRRK2Q5S007 AC073358.1-201ENST00000505671 684 ntBASIC4.45□□□□□ -1.7
LRRK2Q5S007 TOMM22P4-201ENST00000511318 336 ntBASIC4.45□□□□□ -1.7
LRRK2Q5S007 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRK2Q5S007 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRK2Q5S007 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LRRK2Q5S007 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LRRK2Q5S007 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRRK2Q5S007 AC073365.1-203ENST00000641055 1992 ntBASIC4.45□□□□□ -1.7
LRRK2Q5S007 AC119674.1-213ENST00000641177 1386 ntBASIC4.45□□□□□ -1.7
LRRK2Q5S007 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LRRK2Q5S007 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRRK2Q5S007 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRRK2Q5S007 CDY5P-201ENST00000411487 1580 ntBASIC4.45□□□□□ -1.7
LRRK2Q5S007 CDY9P-201ENST00000451397 1580 ntBASIC4.45□□□□□ -1.7
LRRK2Q5S007 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.45□□□□□ -1.7
LRRK2Q5S007 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms