Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AC127381.1-201ENST00000555979 939 ntBASIC6.85□□□□□ -1.31
CALD1Q05682 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.85□□□□□ -1.31
CALD1Q05682 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CALD1Q05682 MIR6839-201ENST00000620425 113 ntBASIC6.85□□□□□ -1.31
CALD1Q05682 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CALD1Q05682 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CALD1Q05682 AC006210.2-201ENST00000367074 1545 ntBASIC6.85□□□□□ -1.31
CALD1Q05682 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CALD1Q05682 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CALD1Q05682 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
CALD1Q05682 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.85□□□□□ -1.31
CALD1Q05682 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CALD1Q05682 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CALD1Q05682 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CALD1Q05682 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CALD1Q05682 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CALD1Q05682 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CALD1Q05682 OR9K1P-201ENST00000326513 941 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 U3.7-201ENST00000363668 216 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 RNU1-43P-201ENST00000365052 165 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 OR1L6-202ENST00000373684 1044 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 RNU1-74P-201ENST00000384108 171 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CALD1Q05682 DUTP5-201ENST00000406790 469 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 BX510359.3-201ENST00000422168 306 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.84□□□□□ -1.31
CALD1Q05682 AL139148.1-201ENST00000427122 680 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 RPS4XP16-201ENST00000427198 791 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 GAPDHP58-201ENST00000438477 1006 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 RPS29P10-201ENST00000439197 166 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 RN7SL222P-201ENST00000476452 299 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 AC074386.1-201ENST00000476560 767 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 RN7SL814P-201ENST00000487715 300 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 RPS4XP14-201ENST00000493072 781 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 RPL15P21-201ENST00000495592 567 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 RPS26P24-201ENST00000497656 331 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 SNRPCP2-201ENST00000504370 475 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 AC006499.3-201ENST00000506077 748 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 AC098976.1-201ENST00000513014 541 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.84□□□□□ -1.31
CALD1Q05682 OR4A46P-201ENST00000527255 933 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 AC134349.2-201ENST00000535136 910 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.84□□□□□ -1.31
CALD1Q05682 RN7SL290P-201ENST00000578661 300 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.84□□□□□ -1.31
CALD1Q05682 AP005131.7-201ENST00000610087 611 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 AP002505.2-201ENST00000623585 696 ntBASIC6.84□□□□□ -1.31
CALD1Q05682 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.84□□□□□ -1.31
CALD1Q05682 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CALD1Q05682 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.84□□□□□ -1.31
CALD1Q05682 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
CALD1Q05682 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CALD1Q05682 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CALD1Q05682 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.84□□□□□ -1.31
CALD1Q05682 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CALD1Q05682 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.84□□□□□ -1.31
CALD1Q05682 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CALD1Q05682 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CALD1Q05682 CDY11P-201ENST00000447168 1651 ntBASIC6.84□□□□□ -1.32
CALD1Q05682 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CALD1Q05682 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CALD1Q05682 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.84□□□□□ -1.32
CALD1Q05682 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CALD1Q05682 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CALD1Q05682 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
CALD1Q05682 SOCS5P3-201ENST00000425115 1576 ntBASIC6.83□□□□□ -1.32
CALD1Q05682 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CALD1Q05682 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
CALD1Q05682 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CALD1Q05682 RNA5SP90-201ENST00000364801 99 ntBASIC6.83□□□□□ -1.32
CALD1Q05682 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.83□□□□□ -1.32
CALD1Q05682 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.83□□□□□ -1.32
CALD1Q05682 NOP56P2-201ENST00000447491 769 ntBASIC6.83□□□□□ -1.32
CALD1Q05682 CBX1P2-201ENST00000453841 458 ntBASIC6.83□□□□□ -1.32
CALD1Q05682 AP002371.1-201ENST00000463604 433 ntBASIC6.83□□□□□ -1.32
CALD1Q05682 AC069304.1-201ENST00000491593 704 ntBASIC6.83□□□□□ -1.32
CALD1Q05682 RPSAP51-201ENST00000497462 645 ntBASIC6.83□□□□□ -1.32
CALD1Q05682 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.83□□□□□ -1.32
CALD1Q05682 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.83□□□□□ -1.32
CALD1Q05682 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.83□□□□□ -1.32
CALD1Q05682 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.83□□□□□ -1.32
CALD1Q05682 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.83□□□□□ -1.32
CALD1Q05682 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.83□□□□□ -1.32
CALD1Q05682 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CALD1Q05682 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.83□□□□□ -1.32
CALD1Q05682 AC011626.1-201ENST00000604710 562 ntBASIC6.83□□□□□ -1.32
CALD1Q05682 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.83□□□□□ -1.32
CALD1Q05682 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.83□□□□□ -1.32
CALD1Q05682 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.83□□□□□ -1.32
CALD1Q05682 AP003400.2-201ENST00000624036 666 ntBASIC6.83□□□□□ -1.32
CALD1Q05682 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.83□□□□□ -1.32
CALD1Q05682 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.83□□□□□ -1.32
CALD1Q05682 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CALD1Q05682 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CALD1Q05682 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CALD1Q05682 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CALD1Q05682 PANDAR-201ENST00000629595 1506 ntBASIC6.82□□□□□ -1.32
CALD1Q05682 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CALD1Q05682 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms