Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AL050305.1-201ENST00000399993 1230 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 HSPA8P15-201ENST00000401676 786 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 RN7SKP199-201ENST00000410325 305 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC007738.1-201ENST00000413892 348 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 SLC20A1P1-201ENST00000413906 956 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AL034379.1-201ENST00000423216 253 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 TNPO1P1-201ENST00000423641 1138 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 GSTM5P1-201ENST00000434751 660 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 NDUFA5P5-201ENST00000468361 342 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC093827.1-201ENST00000480094 861 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC113430.1-201ENST00000506872 718 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 RNA5SP464-201ENST00000516251 108 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC130364.2-201ENST00000528639 604 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC005363.1-201ENST00000530779 351 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC100767.2-201ENST00000604840 693 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC108865.2-201ENST00000606881 432 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC244107.2-201ENST00000611773 76 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AC131238.1-201ENST00000617135 328 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 TET1P1-201ENST00000426627 2301 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 AP001273.1-201ENST00000624493 3152 ntBASIC4.04□□□□□ -1.76
HIST1H1AQ02539 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
HIST1H1AQ02539 OR14L1P-202ENST00000641545 3009 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 XKRY2-202ENST00000623874 1581 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 XKRY-202ENST00000624960 1581 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 OR9G4-201ENST00000302957 984 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 RPL12P9-201ENST00000412942 488 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 OR6E1P-201ENST00000414424 923 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 RPL24P2-201ENST00000421023 475 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 RPL36AP10-201ENST00000421785 322 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AC124944.2-201ENST00000429866 1242 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 RPL36AP39-201ENST00000445859 318 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AC073587.1-201ENST00000447093 876 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AL672138.1-201ENST00000450604 1015 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 RN7SL51P-201ENST00000468230 285 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 HMGB3P16-201ENST00000508037 287 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AF186190.1-201ENST00000517470 480 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AC100784.1-201ENST00000522790 310 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 OR11H3P-201ENST00000554547 982 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AC005726.4-201ENST00000582858 458 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 RN7SL52P-201ENST00000584271 284 ntBASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.03□□□□□ -1.76
HIST1H1AQ02539 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms