Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LMO4P61968 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.44□□□□□ -1.7
LMO4P61968 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LMO4P61968 PROS2P-201ENST00000474651 1951 ntBASIC4.44□□□□□ -1.7
LMO4P61968 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LMO4P61968 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.44□□□□□ -1.7
LMO4P61968 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LMO4P61968 SNORA17.1-201ENST00000362945 126 ntBASIC4.44□□□□□ -1.7
LMO4P61968 RNU6-819P-201ENST00000364116 107 ntBASIC4.44□□□□□ -1.7
LMO4P61968 OR13C3-201ENST00000374781 1108 ntBASIC4.44□□□□□ -1.7
LMO4P61968 DBIP1-201ENST00000401435 260 ntBASIC4.44□□□□□ -1.7
LMO4P61968 HSPA8P15-201ENST00000401676 786 ntBASIC4.44□□□□□ -1.7
LMO4P61968 RN7SKP125-201ENST00000410481 302 ntBASIC4.44□□□□□ -1.7
LMO4P61968 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.44□□□□□ -1.7
LMO4P61968 AL357078.2-201ENST00000416486 427 ntBASIC4.44□□□□□ -1.7
LMO4P61968 PTP4A1P1-201ENST00000420539 515 ntBASIC4.44□□□□□ -1.7
LMO4P61968 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.44□□□□□ -1.7
LMO4P61968 MTCO2P17-201ENST00000424336 677 ntBASIC4.44□□□□□ -1.7
LMO4P61968 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.44□□□□□ -1.7
LMO4P61968 AL138787.1-202ENST00000437804 898 ntBASIC4.44□□□□□ -1.7
LMO4P61968 BX679664.2-201ENST00000439282 283 ntBASIC4.44□□□□□ -1.7
LMO4P61968 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.44□□□□□ -1.7
LMO4P61968 LINC02210-201ENST00000444561 288 ntBASIC4.44□□□□□ -1.7
LMO4P61968 RPS15AP29-201ENST00000445539 400 ntBASIC4.44□□□□□ -1.7
LMO4P61968 AC093827.1-201ENST00000480094 861 ntBASIC4.44□□□□□ -1.7
LMO4P61968 RPL7P40-201ENST00000481703 745 ntBASIC4.44□□□□□ -1.7
LMO4P61968 RN7SL97P-201ENST00000486780 299 ntBASIC4.44□□□□□ -1.7
LMO4P61968 AC109462.1-201ENST00000491087 368 ntBASIC4.44□□□□□ -1.7
LMO4P61968 AC021106.1-201ENST00000509020 1058 ntBASIC4.44□□□□□ -1.7
LMO4P61968 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.44□□□□□ -1.7
LMO4P61968 RN7SKP67-201ENST00000515905 235 ntBASIC4.44□□□□□ -1.7
LMO4P61968 RNU6-319P-201ENST00000516025 108 ntBASIC4.44□□□□□ -1.7
LMO4P61968 RN7SKP34-201ENST00000516142 244 ntBASIC4.44□□□□□ -1.7
LMO4P61968 SNORA70.17-201ENST00000516449 133 ntBASIC4.44□□□□□ -1.7
LMO4P61968 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LMO4P61968 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.44□□□□□ -1.7
LMO4P61968 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.44□□□□□ -1.7
LMO4P61968 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.44□□□□□ -1.7
LMO4P61968 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.44□□□□□ -1.7
LMO4P61968 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
LMO4P61968 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.44□□□□□ -1.7
LMO4P61968 RN7SL356P-201ENST00000582228 248 ntBASIC4.44□□□□□ -1.7
LMO4P61968 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.44□□□□□ -1.7
LMO4P61968 BNIP3P31-201ENST00000604515 566 ntBASIC4.44□□□□□ -1.7
LMO4P61968 AC024940.4-201ENST00000605507 246 ntBASIC4.44□□□□□ -1.7
LMO4P61968 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC4.44□□□□□ -1.7
LMO4P61968 AC084824.5-201ENST00000612009 413 ntBASIC4.44□□□□□ -1.7
LMO4P61968 AL050303.3-201ENST00000613704 284 ntBASIC4.44□□□□□ -1.7
LMO4P61968 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
LMO4P61968 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.44□□□□□ -1.7
LMO4P61968 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LMO4P61968 OR6C71P-202ENST00000641886 1107 ntBASIC4.44□□□□□ -1.7
LMO4P61968 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LMO4P61968 HSPA8P19-201ENST00000505359 1517 ntBASIC4.44□□□□□ -1.7
LMO4P61968 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
LMO4P61968 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
LMO4P61968 OR10AB1P-202ENST00000641219 1686 ntBASIC4.44□□□□□ -1.7
LMO4P61968 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LMO4P61968 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.44□□□□□ -1.7
LMO4P61968 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LMO4P61968 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.44□□□□□ -1.7
LMO4P61968 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LMO4P61968 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.43□□□□□ -1.7
LMO4P61968 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
LMO4P61968 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LMO4P61968 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.43□□□□□ -1.7
LMO4P61968 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.43□□□□□ -1.7
LMO4P61968 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
LMO4P61968 HSPA8P18-201ENST00000439846 1928 ntBASIC4.43□□□□□ -1.7
LMO4P61968 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
LMO4P61968 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LMO4P61968 AC003985.2-201ENST00000562268 1669 ntBASIC4.43□□□□□ -1.7
LMO4P61968 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LMO4P61968 U3.10-201ENST00000364459 214 ntBASIC4.43□□□□□ -1.7
LMO4P61968 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LMO4P61968 AL672167.2-201ENST00000377164 879 ntBASIC4.43□□□□□ -1.7
LMO4P61968 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LMO4P61968 OR1F12-201ENST00000402365 945 ntBASIC4.43□□□□□ -1.7
LMO4P61968 ATP5F1P6-201ENST00000402768 767 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.43□□□□□ -1.7
LMO4P61968 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.43□□□□□ -1.7
LMO4P61968 RPL23AP18-201ENST00000416139 468 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.43□□□□□ -1.7
LMO4P61968 AJ239321.1-201ENST00000424255 564 ntBASIC4.43□□□□□ -1.7
LMO4P61968 CR848007.2-201ENST00000424918 787 ntBASIC4.43□□□□□ -1.7
LMO4P61968 FAR1P1-201ENST00000427163 934 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AL590399.2-201ENST00000427536 309 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.43□□□□□ -1.7
LMO4P61968 Z85994.2-201ENST00000434327 452 ntBASIC4.43□□□□□ -1.7
LMO4P61968 PSMD10P3-201ENST00000437000 448 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.43□□□□□ -1.7
LMO4P61968 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.43□□□□□ -1.7
LMO4P61968 AC074367.1-201ENST00000438685 1125 ntBASIC4.43□□□□□ -1.7
LMO4P61968 RPL12P3-201ENST00000440080 396 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.43□□□□□ -1.7
LMO4P61968 AC073850.1-201ENST00000449243 255 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC098826.2-201ENST00000452011 651 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.43□□□□□ -1.7
LMO4P61968 PSAT1P4-201ENST00000466500 526 ntBASIC4.43□□□□□ -1.7
LMO4P61968 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms