Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH13P55290 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH13P55290 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
CDH13P55290 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH13P55290 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH13P55290 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH13P55290 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CDH13P55290 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH13P55290 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH13P55290 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CDH13P55290 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH13P55290 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH13P55290 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CDH13P55290 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH13P55290 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CDH13P55290 GAPDHP42-201ENST00000406848 981 ntBASIC5.27□□□□□ -1.57
CDH13P55290 RANP4-201ENST00000413361 655 ntBASIC5.27□□□□□ -1.57
CDH13P55290 RPL24P2-201ENST00000421023 475 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH13P55290 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH13P55290 ZNF965P-201ENST00000432501 817 ntBASIC5.27□□□□□ -1.57
CDH13P55290 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH13P55290 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH13P55290 XKRY2-201ENST00000442362 1093 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AC019185.1-201ENST00000442718 389 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AL445665.1-202ENST00000452436 324 ntBASIC5.27□□□□□ -1.57
CDH13P55290 LDHBP2-201ENST00000456969 1005 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AC107015.1-201ENST00000466902 747 ntBASIC5.27□□□□□ -1.57
CDH13P55290 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH13P55290 AC109481.1-201ENST00000509173 282 ntBASIC5.27□□□□□ -1.57
CDH13P55290 CYCSP22-201ENST00000517555 339 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH13P55290 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH13P55290 TOMM20P1-201ENST00000534518 427 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH13P55290 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH13P55290 AC107958.1-201ENST00000556576 290 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH13P55290 AC012616.1-201ENST00000600294 197 ntBASIC5.27□□□□□ -1.57
CDH13P55290 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AC079315.1-201ENST00000602952 623 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AC242628.1-201ENST00000606810 391 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AC004241.3-201ENST00000611728 517 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AC008115.3-201ENST00000614874 549 ntBASIC5.27□□□□□ -1.57
CDH13P55290 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH13P55290 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
CDH13P55290 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CDH13P55290 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH13P55290 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH13P55290 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH13P55290 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH13P55290 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH13P55290 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CDH13P55290 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH13P55290 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH13P55290 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CDH13P55290 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.26□□□□□ -1.57
CDH13P55290 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH13P55290 RN7SKP28-201ENST00000364770 305 ntBASIC5.26□□□□□ -1.57
CDH13P55290 RNU2-72P-201ENST00000411175 163 ntBASIC5.26□□□□□ -1.57
CDH13P55290 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH13P55290 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH13P55290 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.26□□□□□ -1.57
CDH13P55290 MTND4P24-201ENST00000424002 397 ntBASIC5.26□□□□□ -1.57
CDH13P55290 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH13P55290 BX119321.1-201ENST00000428912 797 ntBASIC5.26□□□□□ -1.57
CDH13P55290 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH13P55290 FMO7P-201ENST00000436045 768 ntBASIC5.26□□□□□ -1.57
CDH13P55290 SUMO2P3-201ENST00000438311 288 ntBASIC5.26□□□□□ -1.57
CDH13P55290 AC016772.1-201ENST00000444170 1261 ntBASIC5.26□□□□□ -1.57
CDH13P55290 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH13P55290 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH13P55290 CALM1P2-201ENST00000452941 448 ntBASIC5.26□□□□□ -1.57
CDH13P55290 AL035090.1-201ENST00000454835 332 ntBASIC5.26□□□□□ -1.57
CDH13P55290 RN7SL72P-201ENST00000460697 269 ntBASIC5.26□□□□□ -1.57
CDH13P55290 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH13P55290 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDH13P55290 AC092754.1-201ENST00000472975 479 ntBASIC5.26□□□□□ -1.57
CDH13P55290 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH13P55290 IMPA1P1-201ENST00000510718 842 ntBASIC5.26□□□□□ -1.57
CDH13P55290 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH13P55290 MTND6P2-201ENST00000512226 524 ntBASIC5.26□□□□□ -1.57
CDH13P55290 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH13P55290 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH13P55290 AC005363.1-201ENST00000530779 351 ntBASIC5.26□□□□□ -1.57
CDH13P55290 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH13P55290 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH13P55290 AC079600.1-201ENST00000550326 297 ntBASIC5.26□□□□□ -1.57
CDH13P55290 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH13P55290 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH13P55290 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH13P55290 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH13P55290 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH13P55290 RBM22P12-201ENST00000567098 1255 ntBASIC5.26□□□□□ -1.57
CDH13P55290 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH13P55290 AL499605.1-201ENST00000604628 403 ntBASIC5.26□□□□□ -1.57
CDH13P55290 AL118522.2-201ENST00000616045 615 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms