Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.56□□□□□ -1.52
LIMK1P53667 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.56□□□□□ -1.52
LIMK1P53667 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.56□□□□□ -1.52
LIMK1P53667 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.56□□□□□ -1.52
LIMK1P53667 FAM106CP-201ENST00000582212 507 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK1P53667 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK1P53667 AC012616.1-201ENST00000600294 197 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 AL022394.1-201ENST00000606979 292 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 AC023813.4-201ENST00000607580 580 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 AL118556.2-201ENST00000614375 824 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 AC091953.3-201ENST00000623220 236 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 AP002505.2-201ENST00000623585 696 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 AP002967.1-201ENST00000624203 539 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
LIMK1P53667 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.56□□□□□ -1.52
LIMK1P53667 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.56□□□□□ -1.52
LIMK1P53667 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.56□□□□□ -1.52
LIMK1P53667 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LIMK1P53667 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
LIMK1P53667 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK1P53667 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
LIMK1P53667 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK1P53667 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LIMK1P53667 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.55□□□□□ -1.52
LIMK1P53667 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK1P53667 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
LIMK1P53667 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK1P53667 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LIMK1P53667 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LIMK1P53667 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LIMK1P53667 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK1P53667 U3.2-201ENST00000362981 210 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 AC013442.1-201ENST00000397347 228 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 RPS4XP9-201ENST00000405151 780 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.55□□□□□ -1.52
LIMK1P53667 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 MTCO1P57-201ENST00000432182 261 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK1P53667 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK1P53667 AP000547.1-201ENST00000454360 617 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 PRELID3BP5-201ENST00000508612 460 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.55□□□□□ -1.52
LIMK1P53667 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK1P53667 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
LIMK1P53667 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK1P53667 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK1P53667 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK1P53667 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.55□□□□□ -1.52
LIMK1P53667 BRD9P1-201ENST00000529855 560 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.55□□□□□ -1.52
LIMK1P53667 AC005224.3-201ENST00000584683 2140 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.55□□□□□ -1.52
LIMK1P53667 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.55□□□□□ -1.52
LIMK1P53667 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK1P53667 AC000068.2-201ENST00000608816 460 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LIMK1P53667 TMEM30CP-203ENST00000637814 1035 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 LINC01739-205ENST00000641890 573 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK1P53667 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
LIMK1P53667 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.55□□□□□ -1.52
LIMK1P53667 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK1P53667 AL078621.3-201ENST00000623707 2042 ntBASIC5.55□□□□□ -1.52
LIMK1P53667 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK1P53667 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.55□□□□□ -1.52
LIMK1P53667 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK1P53667 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
LIMK1P53667 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.54□□□□□ -1.52
LIMK1P53667 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.54□□□□□ -1.52
LIMK1P53667 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LIMK1P53667 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.54□□□□□ -1.52
LIMK1P53667 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LIMK1P53667 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
LIMK1P53667 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.54□□□□□ -1.52
LIMK1P53667 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 OR10AB1P-202ENST00000641219 1686 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 NXF4-202ENST00000416098 1465 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LIMK1P53667 OR5T3-201ENST00000303059 1023 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 RNA5SP335-201ENST00000363817 110 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 CYB5AP4-201ENST00000396692 399 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 AL136131.1-201ENST00000406079 803 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 U3.36-201ENST00000408418 213 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.54□□□□□ -1.52
LIMK1P53667 NENFP1-201ENST00000419476 466 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.54□□□□□ -1.52
LIMK1P53667 AL663074.2-201ENST00000440621 479 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 RPL7L1P1-201ENST00000448259 785 ntBASIC5.54□□□□□ -1.52
LIMK1P53667 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms