Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.16□□□□□ -1.26
MSH6P52701 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
MSH6P52701 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
MSH6P52701 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
MSH6P52701 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
MSH6P52701 MAPK10-263ENST00000641052 4307 ntBASIC7.16□□□□□ -1.26
MSH6P52701 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.16□□□□□ -1.26
MSH6P52701 SNORA48.7-201ENST00000391302 135 ntBASIC7.16□□□□□ -1.26
MSH6P52701 AC122718.1-201ENST00000439448 744 ntBASIC7.16□□□□□ -1.26
MSH6P52701 snoU13.29-201ENST00000459370 104 ntBASIC7.16□□□□□ -1.26
MSH6P52701 FAM133DP-201ENST00000464802 691 ntBASIC7.16□□□□□ -1.26
MSH6P52701 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC7.16□□□□□ -1.26
MSH6P52701 HMGB1P23-201ENST00000518743 568 ntBASIC7.16□□□□□ -1.26
MSH6P52701 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.16□□□□□ -1.26
MSH6P52701 AP003080.1-202ENST00000526526 915 ntBASIC7.16□□□□□ -1.26
MSH6P52701 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.16□□□□□ -1.26
MSH6P52701 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.16□□□□□ -1.26
MSH6P52701 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.16□□□□□ -1.26
MSH6P52701 AP001357.1-201ENST00000586304 1053 ntBASIC7.16□□□□□ -1.26
MSH6P52701 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.16□□□□□ -1.26
MSH6P52701 AL353729.2-201ENST00000605859 1249 ntBASIC7.16□□□□□ -1.26
MSH6P52701 AC069542.2-201ENST00000624816 216 ntBASIC7.16□□□□□ -1.26
MSH6P52701 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
MSH6P52701 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
MSH6P52701 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
MSH6P52701 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
MSH6P52701 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
MSH6P52701 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
MSH6P52701 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.15□□□□□ -1.26
MSH6P52701 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
MSH6P52701 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
MSH6P52701 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
MSH6P52701 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.15□□□□□ -1.26
MSH6P52701 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
MSH6P52701 AC007998.4-201ENST00000612496 2533 ntBASIC7.15□□□□□ -1.26
MSH6P52701 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
MSH6P52701 U3.10-201ENST00000364459 214 ntBASIC7.15□□□□□ -1.26
MSH6P52701 RNA5SP515-201ENST00000364570 118 ntBASIC7.15□□□□□ -1.26
MSH6P52701 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.15□□□□□ -1.26
MSH6P52701 OR8V1P-201ENST00000395193 873 ntBASIC7.15□□□□□ -1.26
MSH6P52701 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.15□□□□□ -1.26
MSH6P52701 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC7.15□□□□□ -1.26
MSH6P52701 RPL12P20-201ENST00000475538 479 ntBASIC7.15□□□□□ -1.26
MSH6P52701 AC021106.1-201ENST00000509020 1058 ntBASIC7.15□□□□□ -1.26
MSH6P52701 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.15□□□□□ -1.26
MSH6P52701 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.26
MSH6P52701 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.15□□□□□ -1.26
MSH6P52701 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC7.15□□□□□ -1.26
MSH6P52701 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
MSH6P52701 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
MSH6P52701 AC005962.2-201ENST00000611427 652 ntBASIC7.15□□□□□ -1.26
MSH6P52701 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC7.15□□□□□ -1.26
MSH6P52701 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC7.15□□□□□ -1.26
MSH6P52701 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
MSH6P52701 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
MSH6P52701 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC7.15□□□□□ -1.27
MSH6P52701 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
MSH6P52701 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MSH6P52701 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.14□□□□□ -1.27
MSH6P52701 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.14□□□□□ -1.27
MSH6P52701 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.14□□□□□ -1.27
MSH6P52701 U3.22-201ENST00000391120 215 ntBASIC7.14□□□□□ -1.27
MSH6P52701 AL021331.1-201ENST00000402817 582 ntBASIC7.14□□□□□ -1.27
MSH6P52701 RNU4-25P-201ENST00000410569 230 ntBASIC7.14□□□□□ -1.27
MSH6P52701 ELOCP19-201ENST00000411919 318 ntBASIC7.14□□□□□ -1.27
MSH6P52701 BX510359.2-201ENST00000417920 305 ntBASIC7.14□□□□□ -1.27
MSH6P52701 CYP4F29P-201ENST00000420685 446 ntBASIC7.14□□□□□ -1.27
MSH6P52701 OR10T1P-201ENST00000424327 947 ntBASIC7.14□□□□□ -1.27
MSH6P52701 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.14□□□□□ -1.27
MSH6P52701 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC7.14□□□□□ -1.27
MSH6P52701 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC7.14□□□□□ -1.27
MSH6P52701 AL354714.3-201ENST00000447284 493 ntBASIC7.14□□□□□ -1.27
MSH6P52701 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.14□□□□□ -1.27
MSH6P52701 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC7.14□□□□□ -1.27
MSH6P52701 CCDC58P3-201ENST00000590792 430 ntBASIC7.14□□□□□ -1.27
MSH6P52701 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
MSH6P52701 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MSH6P52701 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MSH6P52701 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
MSH6P52701 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MSH6P52701 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.14□□□□□ -1.27
MSH6P52701 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MSH6P52701 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC7.13□□□□□ -1.27
MSH6P52701 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
MSH6P52701 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
MSH6P52701 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MSH6P52701 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
MSH6P52701 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MSH6P52701 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
MSH6P52701 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MSH6P52701 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
MSH6P52701 OR4K15-201ENST00000305051 1216 ntBASIC7.13□□□□□ -1.27
MSH6P52701 MIR23B-201ENST00000384832 97 ntBASIC7.13□□□□□ -1.27
MSH6P52701 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC7.13□□□□□ -1.27
MSH6P52701 SNORD125-201ENST00000459538 96 ntBASIC7.13□□□□□ -1.27
MSH6P52701 RPL5P12-201ENST00000477071 851 ntBASIC7.13□□□□□ -1.27
MSH6P52701 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.13□□□□□ -1.27
MSH6P52701 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC7.13□□□□□ -1.27
MSH6P52701 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.13□□□□□ -1.27
MSH6P52701 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms